Gene : AP19 A. thaliana TAIR10
Primary Identifier:  ? AT2G17380 Defline:  (1 of 2) K12394 - AP-1 complex subunit sigma 1/2 (AP1S1_2)
Genomic Order:  967 Name:  ? AT2G17380
Secondary Identifier:  ? PAC:19639413
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17380 0.5kb upstream 0.5kb upstream 2544 true Chr2: 7552502-7555045 Arabidopsis thaliana
AT2G17380 0.5kb upstream 0.5kb upstream 500 false Chr2: 7552502-7553001 Arabidopsis thaliana
AT2G17380 0.5kb downstream 0.5kb downstream 2544 true Chr2: 7553002-7555545 Arabidopsis thaliana
AT2G17380 0.5kb downstream 0.5kb downstream 500 false Chr2: 7555046-7555545 Arabidopsis thaliana
AT2G17380 1.0kb upstream 1.0kb upstream 3044 true Chr2: 7552002-7555045 Arabidopsis thaliana
AT2G17380 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7552002-7553001 Arabidopsis thaliana
AT2G17380 1.0kb downstream 1.0kb downstream 3044 true Chr2: 7553002-7556045 Arabidopsis thaliana
AT2G17380 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7555046-7556045 Arabidopsis thaliana
AT2G17380 2.0kb upstream 2.0kb upstream 4044 true Chr2: 7551002-7555045 Arabidopsis thaliana
AT2G17380 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7551002-7553001 Arabidopsis thaliana
AT2G17380 2.0kb downstream 2.0kb downstream 4044 true Chr2: 7553002-7557045 Arabidopsis thaliana
AT2G17380 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7555046-7557045 Arabidopsis thaliana
AT2G17380 5.0kb upstream 5.0kb upstream 7044 true Chr2: 7548002-7555045 Arabidopsis thaliana
AT2G17380 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7548002-7553001 Arabidopsis thaliana
AT2G17380 5.0kb downstream 5.0kb downstream 7044 true Chr2: 7553002-7560045 Arabidopsis thaliana
AT2G17380 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7555046-7560045 Arabidopsis thaliana
AT2G17380 10.0kb upstream 10.0kb upstream 12044 true Chr2: 7543002-7555045 Arabidopsis thaliana
AT2G17380 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7543002-7553001 Arabidopsis thaliana
AT2G17380 10.0kb downstream 10.0kb downstream 12044 true Chr2: 7553002-7565045 Arabidopsis thaliana
AT2G17380 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7555046-7565045 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364248 5261 Brassicaceae View MSA
123837085 5264 Brassicales-Malvales View MSA
124345365 5266 SBM View MSA
124253668 5268 Malvidae View MSA
124061587 5270 Rosid View MSA
123746218 5271 Pentapetalae View MSA
122797557 5272 Eudicot View MSA
122046601 5273 Angiosperm View MSA
121344866 5274 Embryophyte View MSA
123426690 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.089        
cufflinks 19.424        
cufflinks 13.302       Low
cufflinks 19.268        
cufflinks 14.535        
cufflinks 19.863        

0 Strain