Gene : MSI2 A. thaliana TAIR10
Primary Identifier:  ? AT2G16780 Defline:  (1 of 5) K10752 - histone-binding protein RBBP4 (RBBP4, HAT2, CAF1, MIS16)
Genomic Order:  903 Name:  ? AT2G16780
Secondary Identifier:  ? PAC:19640663
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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G16780 0.5kb upstream 0.5kb upstream 2685 true Chr2: 7281462-7284146 Arabidopsis thaliana
AT2G16780 0.5kb upstream 0.5kb upstream 500 false Chr2: 7283647-7284146 Arabidopsis thaliana
AT2G16780 0.5kb downstream 0.5kb downstream 2685 true Chr2: 7280962-7283646 Arabidopsis thaliana
AT2G16780 0.5kb downstream 0.5kb downstream 500 false Chr2: 7280962-7281461 Arabidopsis thaliana
AT2G16780 1.0kb upstream 1.0kb upstream 3185 true Chr2: 7281462-7284646 Arabidopsis thaliana
AT2G16780 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7283647-7284646 Arabidopsis thaliana
AT2G16780 1.0kb downstream 1.0kb downstream 3185 true Chr2: 7280462-7283646 Arabidopsis thaliana
AT2G16780 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7280462-7281461 Arabidopsis thaliana
AT2G16780 2.0kb upstream 2.0kb upstream 4185 true Chr2: 7281462-7285646 Arabidopsis thaliana
AT2G16780 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7283647-7285646 Arabidopsis thaliana
AT2G16780 2.0kb downstream 2.0kb downstream 4185 true Chr2: 7279462-7283646 Arabidopsis thaliana
AT2G16780 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7279462-7281461 Arabidopsis thaliana
AT2G16780 5.0kb upstream 5.0kb upstream 7185 true Chr2: 7281462-7288646 Arabidopsis thaliana
AT2G16780 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7283647-7288646 Arabidopsis thaliana
AT2G16780 5.0kb downstream 5.0kb downstream 7185 true Chr2: 7276462-7283646 Arabidopsis thaliana
AT2G16780 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7276462-7281461 Arabidopsis thaliana
AT2G16780 10.0kb upstream 10.0kb upstream 12185 true Chr2: 7281462-7293646 Arabidopsis thaliana
AT2G16780 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7283647-7293646 Arabidopsis thaliana
AT2G16780 10.0kb downstream 10.0kb downstream 12185 true Chr2: 7271462-7283646 Arabidopsis thaliana
AT2G16780 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7271462-7281461 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026585 5273 Angiosperm View MSA
122373659 5261 Brassicaceae View MSA
123836879 5264 Brassicales-Malvales View MSA
124339438 5266 SBM View MSA
124240099 5268 Malvidae View MSA
124062099 5270 Rosid View MSA
123737896 5271 Pentapetalae View MSA
122786745 5272 Eudicot View MSA
121350438 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.486        
cufflinks 22.651        
cufflinks 9.126        
cufflinks 22.154        
cufflinks 7.946       Low
cufflinks 23.462        

0 Strain