Gene : AT2G16630 A. thaliana TAIR10
Defline:  (1 of 29) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  889
Name:  ? AT2G16630 Secondary Identifier:  ? PAC:19640305
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G16630 0.5kb upstream 0.5kb upstream 2299 true Chr2: 7208739-7211037 Arabidopsis thaliana
AT2G16630 0.5kb upstream 0.5kb upstream 500 false Chr2: 7208739-7209238 Arabidopsis thaliana
AT2G16630 0.5kb downstream 0.5kb downstream 2299 true Chr2: 7209239-7211537 Arabidopsis thaliana
AT2G16630 0.5kb downstream 0.5kb downstream 500 false Chr2: 7211038-7211537 Arabidopsis thaliana
AT2G16630 1.0kb upstream 1.0kb upstream 2799 true Chr2: 7208239-7211037 Arabidopsis thaliana
AT2G16630 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7208239-7209238 Arabidopsis thaliana
AT2G16630 1.0kb downstream 1.0kb downstream 2799 true Chr2: 7209239-7212037 Arabidopsis thaliana
AT2G16630 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7211038-7212037 Arabidopsis thaliana
AT2G16630 2.0kb upstream 2.0kb upstream 3799 true Chr2: 7207239-7211037 Arabidopsis thaliana
AT2G16630 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7207239-7209238 Arabidopsis thaliana
AT2G16630 2.0kb downstream 2.0kb downstream 3799 true Chr2: 7209239-7213037 Arabidopsis thaliana
AT2G16630 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7211038-7213037 Arabidopsis thaliana
AT2G16630 5.0kb upstream 5.0kb upstream 6799 true Chr2: 7204239-7211037 Arabidopsis thaliana
AT2G16630 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7204239-7209238 Arabidopsis thaliana
AT2G16630 5.0kb downstream 5.0kb downstream 6799 true Chr2: 7209239-7216037 Arabidopsis thaliana
AT2G16630 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7211038-7216037 Arabidopsis thaliana
AT2G16630 10.0kb upstream 10.0kb upstream 11799 true Chr2: 7199239-7211037 Arabidopsis thaliana
AT2G16630 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7199239-7209238 Arabidopsis thaliana
AT2G16630 10.0kb downstream 10.0kb downstream 11799 true Chr2: 7209239-7221037 Arabidopsis thaliana
AT2G16630 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7211038-7221037 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369663 5261 Brassicaceae View MSA
123827483 5264 Brassicales-Malvales View MSA
124345773 5266 SBM View MSA
124238500 5268 Malvidae View MSA
124061296 5270 Rosid View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.233       High
cufflinks 0.37       Low
cufflinks 1.886        
cufflinks 1.017        
cufflinks 1.413        
cufflinks 0.697        

0 Strain