Gene : AT2G14850 A. thaliana TAIR10
Defline:  (1 of 5) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  748
Name:  ? AT2G14850 Secondary Identifier:  ? PAC:19639268
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G14850 0.5kb upstream 0.5kb upstream 2199 true Chr2: 6385372-6387570 Arabidopsis thaliana
AT2G14850 0.5kb upstream 0.5kb upstream 500 false Chr2: 6385372-6385871 Arabidopsis thaliana
AT2G14850 0.5kb downstream 0.5kb downstream 2199 true Chr2: 6385872-6388070 Arabidopsis thaliana
AT2G14850 0.5kb downstream 0.5kb downstream 500 false Chr2: 6387571-6388070 Arabidopsis thaliana
AT2G14850 1.0kb upstream 1.0kb upstream 2699 true Chr2: 6384872-6387570 Arabidopsis thaliana
AT2G14850 1.0kb upstream 1.0kb upstream 1000 false Chr2: 6384872-6385871 Arabidopsis thaliana
AT2G14850 1.0kb downstream 1.0kb downstream 2699 true Chr2: 6385872-6388570 Arabidopsis thaliana
AT2G14850 1.0kb downstream 1.0kb downstream 1000 false Chr2: 6387571-6388570 Arabidopsis thaliana
AT2G14850 2.0kb upstream 2.0kb upstream 3699 true Chr2: 6383872-6387570 Arabidopsis thaliana
AT2G14850 2.0kb upstream 2.0kb upstream 2000 false Chr2: 6383872-6385871 Arabidopsis thaliana
AT2G14850 2.0kb downstream 2.0kb downstream 3699 true Chr2: 6385872-6389570 Arabidopsis thaliana
AT2G14850 2.0kb downstream 2.0kb downstream 2000 false Chr2: 6387571-6389570 Arabidopsis thaliana
AT2G14850 5.0kb upstream 5.0kb upstream 6699 true Chr2: 6380872-6387570 Arabidopsis thaliana
AT2G14850 5.0kb upstream 5.0kb upstream 5000 false Chr2: 6380872-6385871 Arabidopsis thaliana
AT2G14850 5.0kb downstream 5.0kb downstream 6699 true Chr2: 6385872-6392570 Arabidopsis thaliana
AT2G14850 5.0kb downstream 5.0kb downstream 5000 false Chr2: 6387571-6392570 Arabidopsis thaliana
AT2G14850 10.0kb upstream 10.0kb upstream 11699 true Chr2: 6375872-6387570 Arabidopsis thaliana
AT2G14850 10.0kb upstream 10.0kb upstream 10000 false Chr2: 6375872-6385871 Arabidopsis thaliana
AT2G14850 10.0kb downstream 10.0kb downstream 11699 true Chr2: 6385872-6397570 Arabidopsis thaliana
AT2G14850 10.0kb downstream 10.0kb downstream 10000 false Chr2: 6387571-6397570 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364902 5261 Brassicaceae View MSA
123798858 5264 Brassicales-Malvales View MSA
124296441 5266 SBM View MSA
124148595 5268 Malvidae View MSA
123874558 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.802        
cufflinks 6.693        
cufflinks 4.905       Low
cufflinks 8.206       High
cufflinks 5.22        
cufflinks 6.478        

0 Strain