Gene : AT2G13840 A. thaliana TAIR10
Defline:  (1 of 1) 3.1.4.57 - Phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase / Cyclic phosphate dihydrolase Genomic Order:  687
Name:  ? AT2G13840 Secondary Identifier:  ? PAC:19640576
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G13840 0.5kb upstream 0.5kb upstream 3075 true Chr2: 5788552-5791626 Arabidopsis thaliana
AT2G13840 0.5kb upstream 0.5kb upstream 500 false Chr2: 5791127-5791626 Arabidopsis thaliana
AT2G13840 0.5kb downstream 0.5kb downstream 3075 true Chr2: 5788052-5791126 Arabidopsis thaliana
AT2G13840 0.5kb downstream 0.5kb downstream 500 false Chr2: 5788052-5788551 Arabidopsis thaliana
AT2G13840 1.0kb upstream 1.0kb upstream 3575 true Chr2: 5788552-5792126 Arabidopsis thaliana
AT2G13840 1.0kb upstream 1.0kb upstream 1000 false Chr2: 5791127-5792126 Arabidopsis thaliana
AT2G13840 1.0kb downstream 1.0kb downstream 3575 true Chr2: 5787552-5791126 Arabidopsis thaliana
AT2G13840 1.0kb downstream 1.0kb downstream 1000 false Chr2: 5787552-5788551 Arabidopsis thaliana
AT2G13840 2.0kb upstream 2.0kb upstream 4575 true Chr2: 5788552-5793126 Arabidopsis thaliana
AT2G13840 2.0kb upstream 2.0kb upstream 2000 false Chr2: 5791127-5793126 Arabidopsis thaliana
AT2G13840 2.0kb downstream 2.0kb downstream 4575 true Chr2: 5786552-5791126 Arabidopsis thaliana
AT2G13840 2.0kb downstream 2.0kb downstream 2000 false Chr2: 5786552-5788551 Arabidopsis thaliana
AT2G13840 5.0kb upstream 5.0kb upstream 7575 true Chr2: 5788552-5796126 Arabidopsis thaliana
AT2G13840 5.0kb upstream 5.0kb upstream 5000 false Chr2: 5791127-5796126 Arabidopsis thaliana
AT2G13840 5.0kb downstream 5.0kb downstream 7575 true Chr2: 5783552-5791126 Arabidopsis thaliana
AT2G13840 5.0kb downstream 5.0kb downstream 5000 false Chr2: 5783552-5788551 Arabidopsis thaliana
AT2G13840 10.0kb upstream 10.0kb upstream 12575 true Chr2: 5788552-5801126 Arabidopsis thaliana
AT2G13840 10.0kb upstream 10.0kb upstream 10000 false Chr2: 5791127-5801126 Arabidopsis thaliana
AT2G13840 10.0kb downstream 10.0kb downstream 12575 true Chr2: 5778552-5791126 Arabidopsis thaliana
AT2G13840 10.0kb downstream 10.0kb downstream 10000 false Chr2: 5778552-5788551 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360618 5261 Brassicaceae View MSA
123828275 5264 Brassicales-Malvales View MSA
124343940 5266 SBM View MSA
124238816 5268 Malvidae View MSA
124074920 5270 Rosid View MSA
123737384 5271 Pentapetalae View MSA
122789973 5272 Eudicot View MSA
122046627 5273 Angiosperm View MSA
121350433 5274 Embryophyte View MSA
123381728 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.866        
cufflinks 3.061        
cufflinks 2.879        
cufflinks 3.159       High
cufflinks 2.555       Low
cufflinks 2.74        

0 Strain