Gene : AT2G09990 A. thaliana TAIR10
Defline:  (1 of 3) K02960 - small subunit ribosomal protein S16e (RP-S16e, RPS16) Genomic Order:  578
Name:  ? AT2G09990 Secondary Identifier:  ? PAC:19638518
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G09990 0.5kb upstream 0.5kb upstream 1222 true Chr2: 3780828-3782049 Arabidopsis thaliana
AT2G09990 0.5kb upstream 0.5kb upstream 500 false Chr2: 3780828-3781327 Arabidopsis thaliana
AT2G09990 0.5kb downstream 0.5kb downstream 1222 true Chr2: 3781328-3782549 Arabidopsis thaliana
AT2G09990 0.5kb downstream 0.5kb downstream 500 false Chr2: 3782050-3782549 Arabidopsis thaliana
AT2G09990 1.0kb upstream 1.0kb upstream 1722 true Chr2: 3780328-3782049 Arabidopsis thaliana
AT2G09990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 3780328-3781327 Arabidopsis thaliana
AT2G09990 1.0kb downstream 1.0kb downstream 1722 true Chr2: 3781328-3783049 Arabidopsis thaliana
AT2G09990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 3782050-3783049 Arabidopsis thaliana
AT2G09990 2.0kb upstream 2.0kb upstream 2722 true Chr2: 3779328-3782049 Arabidopsis thaliana
AT2G09990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 3779328-3781327 Arabidopsis thaliana
AT2G09990 2.0kb downstream 2.0kb downstream 2722 true Chr2: 3781328-3784049 Arabidopsis thaliana
AT2G09990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 3782050-3784049 Arabidopsis thaliana
AT2G09990 5.0kb upstream 5.0kb upstream 5722 true Chr2: 3776328-3782049 Arabidopsis thaliana
AT2G09990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 3776328-3781327 Arabidopsis thaliana
AT2G09990 5.0kb downstream 5.0kb downstream 5722 true Chr2: 3781328-3787049 Arabidopsis thaliana
AT2G09990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 3782050-3787049 Arabidopsis thaliana
AT2G09990 10.0kb upstream 10.0kb upstream 10722 true Chr2: 3771328-3782049 Arabidopsis thaliana
AT2G09990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 3771328-3781327 Arabidopsis thaliana
AT2G09990 10.0kb downstream 10.0kb downstream 10722 true Chr2: 3781328-3792049 Arabidopsis thaliana
AT2G09990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 3782050-3792049 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374465 5261 Brassicaceae View MSA
123840261 5264 Brassicales-Malvales View MSA
124350544 5266 SBM View MSA
124243493 5268 Malvidae View MSA
124069246 5270 Rosid View MSA
123741428 5271 Pentapetalae View MSA
122794496 5272 Eudicot View MSA
122042530 5273 Angiosperm View MSA
121347858 5274 Embryophyte View MSA
123423904 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.593     High  
cufflinks 120.517     High  
cufflinks 65.662     High  
cufflinks 110.352     High  
cufflinks 51.891     High Low
cufflinks 129.208     High High

0 Strain