Gene : FIP1 A. thaliana TAIR10
Primary Identifier:  ? AT2G06005 Defline:  (1 of 2) PF14802 - TMEM192 family (TMEM192)
Genomic Order:  449 Name:  ? AT2G06005
Secondary Identifier:  ? PAC:19639737
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G06005 0.5kb upstream 0.5kb upstream 4110 true Chr2: 2332047-2336156 Arabidopsis thaliana
AT2G06005 0.5kb upstream 0.5kb upstream 500 false Chr2: 2332047-2332546 Arabidopsis thaliana
AT2G06005 0.5kb downstream 0.5kb downstream 4110 true Chr2: 2332547-2336656 Arabidopsis thaliana
AT2G06005 0.5kb downstream 0.5kb downstream 500 false Chr2: 2336157-2336656 Arabidopsis thaliana
AT2G06005 1.0kb upstream 1.0kb upstream 4610 true Chr2: 2331547-2336156 Arabidopsis thaliana
AT2G06005 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2331547-2332546 Arabidopsis thaliana
AT2G06005 1.0kb downstream 1.0kb downstream 4610 true Chr2: 2332547-2337156 Arabidopsis thaliana
AT2G06005 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2336157-2337156 Arabidopsis thaliana
AT2G06005 2.0kb upstream 2.0kb upstream 5610 true Chr2: 2330547-2336156 Arabidopsis thaliana
AT2G06005 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2330547-2332546 Arabidopsis thaliana
AT2G06005 2.0kb downstream 2.0kb downstream 5610 true Chr2: 2332547-2338156 Arabidopsis thaliana
AT2G06005 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2336157-2338156 Arabidopsis thaliana
AT2G06005 5.0kb upstream 5.0kb upstream 8610 true Chr2: 2327547-2336156 Arabidopsis thaliana
AT2G06005 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2327547-2332546 Arabidopsis thaliana
AT2G06005 5.0kb downstream 5.0kb downstream 8610 true Chr2: 2332547-2341156 Arabidopsis thaliana
AT2G06005 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2336157-2341156 Arabidopsis thaliana
AT2G06005 10.0kb upstream 10.0kb upstream 13610 true Chr2: 2322547-2336156 Arabidopsis thaliana
AT2G06005 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2322547-2332546 Arabidopsis thaliana
AT2G06005 10.0kb downstream 10.0kb downstream 13610 true Chr2: 2332547-2346156 Arabidopsis thaliana
AT2G06005 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2336157-2346156 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373219 5261 Brassicaceae View MSA
123838502 5264 Brassicales-Malvales View MSA
124340720 5266 SBM View MSA
124242591 5268 Malvidae View MSA
124068418 5270 Rosid View MSA
123736569 5271 Pentapetalae View MSA
122793760 5272 Eudicot View MSA
122046295 5273 Angiosperm View MSA
121350657 5274 Embryophyte View MSA
123423826 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.54       Low
cufflinks 0.896        
cufflinks 0.566        
cufflinks 0.954       High
cufflinks 0.67        
cufflinks 0.758        

0 Strain