Gene : AT2G05642 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23273//PTHR23273:SF16 - REPLICATION FACTOR A 1, RFA1 // NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN Genomic Order:  426
Name:  ? AT2G05642 Secondary Identifier:  ? PAC:19638854
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05642 0.5kb upstream 0.5kb upstream 3581 true Chr2: 2098087-2101667 Arabidopsis thaliana
AT2G05642 0.5kb upstream 0.5kb upstream 500 false Chr2: 2101168-2101667 Arabidopsis thaliana
AT2G05642 0.5kb downstream 0.5kb downstream 3581 true Chr2: 2097587-2101167 Arabidopsis thaliana
AT2G05642 0.5kb downstream 0.5kb downstream 500 false Chr2: 2097587-2098086 Arabidopsis thaliana
AT2G05642 1.0kb upstream 1.0kb upstream 4081 true Chr2: 2098087-2102167 Arabidopsis thaliana
AT2G05642 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2101168-2102167 Arabidopsis thaliana
AT2G05642 1.0kb downstream 1.0kb downstream 4081 true Chr2: 2097087-2101167 Arabidopsis thaliana
AT2G05642 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2097087-2098086 Arabidopsis thaliana
AT2G05642 2.0kb upstream 2.0kb upstream 5081 true Chr2: 2098087-2103167 Arabidopsis thaliana
AT2G05642 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2101168-2103167 Arabidopsis thaliana
AT2G05642 2.0kb downstream 2.0kb downstream 5081 true Chr2: 2096087-2101167 Arabidopsis thaliana
AT2G05642 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2096087-2098086 Arabidopsis thaliana
AT2G05642 5.0kb upstream 5.0kb upstream 8081 true Chr2: 2098087-2106167 Arabidopsis thaliana
AT2G05642 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2101168-2106167 Arabidopsis thaliana
AT2G05642 5.0kb downstream 5.0kb downstream 8081 true Chr2: 2093087-2101167 Arabidopsis thaliana
AT2G05642 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2093087-2098086 Arabidopsis thaliana
AT2G05642 10.0kb upstream 10.0kb upstream 13081 true Chr2: 2098087-2111167 Arabidopsis thaliana
AT2G05642 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2101168-2111167 Arabidopsis thaliana
AT2G05642 10.0kb downstream 10.0kb downstream 13081 true Chr2: 2088087-2101167 Arabidopsis thaliana
AT2G05642 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2088087-2098086 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122381399 5261 Brassicaceae View MSA
123828875 5264 Brassicales-Malvales View MSA
124321561 5266 SBM View MSA
124251230 5268 Malvidae View MSA
124073687 5270 Rosid View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain