Gene : AT2G04220 A. thaliana TAIR10
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  318
Name:  ? AT2G04220 Secondary Identifier:  ? PAC:19638128
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G04220 0.5kb upstream 0.5kb upstream 1607 true Chr2: 1444901-1446507 Arabidopsis thaliana
AT2G04220 0.5kb upstream 0.5kb upstream 500 false Chr2: 1444901-1445400 Arabidopsis thaliana
AT2G04220 0.5kb downstream 0.5kb downstream 1607 true Chr2: 1445401-1447007 Arabidopsis thaliana
AT2G04220 0.5kb downstream 0.5kb downstream 500 false Chr2: 1446508-1447007 Arabidopsis thaliana
AT2G04220 1.0kb upstream 1.0kb upstream 2107 true Chr2: 1444401-1446507 Arabidopsis thaliana
AT2G04220 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1444401-1445400 Arabidopsis thaliana
AT2G04220 1.0kb downstream 1.0kb downstream 2107 true Chr2: 1445401-1447507 Arabidopsis thaliana
AT2G04220 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1446508-1447507 Arabidopsis thaliana
AT2G04220 2.0kb upstream 2.0kb upstream 3107 true Chr2: 1443401-1446507 Arabidopsis thaliana
AT2G04220 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1443401-1445400 Arabidopsis thaliana
AT2G04220 2.0kb downstream 2.0kb downstream 3107 true Chr2: 1445401-1448507 Arabidopsis thaliana
AT2G04220 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1446508-1448507 Arabidopsis thaliana
AT2G04220 5.0kb upstream 5.0kb upstream 6107 true Chr2: 1440401-1446507 Arabidopsis thaliana
AT2G04220 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1440401-1445400 Arabidopsis thaliana
AT2G04220 5.0kb downstream 5.0kb downstream 6107 true Chr2: 1445401-1451507 Arabidopsis thaliana
AT2G04220 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1446508-1451507 Arabidopsis thaliana
AT2G04220 10.0kb upstream 10.0kb upstream 11107 true Chr2: 1435401-1446507 Arabidopsis thaliana
AT2G04220 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1435401-1445400 Arabidopsis thaliana
AT2G04220 10.0kb downstream 10.0kb downstream 11107 true Chr2: 1445401-1456507 Arabidopsis thaliana
AT2G04220 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1446508-1456507 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371945 5261 Brassicaceae View MSA
123839163 5264 Brassicales-Malvales View MSA
124344672 5266 SBM View MSA
124247851 5268 Malvidae View MSA
124067347 5270 Rosid View MSA
123746466 5271 Pentapetalae View MSA
122797152 5272 Eudicot View MSA
122048974 5273 Angiosperm View MSA
121311194 5274 Embryophyte View MSA
123348523 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low High

0 Strain