Gene : AT2G01720 A. thaliana TAIR10
Defline:  (1 of 2) K12666 - oligosaccharyltransferase complex subunit alpha (ribophorin I) (OST1, RPN1) Genomic Order:  71
Name:  ? AT2G01720 Secondary Identifier:  ? PAC:19643245
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01720 0.5kb upstream 0.5kb upstream 3735 true Chr2: 317030-320764 Arabidopsis thaliana
AT2G01720 0.5kb upstream 0.5kb upstream 500 false Chr2: 320265-320764 Arabidopsis thaliana
AT2G01720 0.5kb downstream 0.5kb downstream 3735 true Chr2: 316530-320264 Arabidopsis thaliana
AT2G01720 0.5kb downstream 0.5kb downstream 500 false Chr2: 316530-317029 Arabidopsis thaliana
AT2G01720 1.0kb upstream 1.0kb upstream 4235 true Chr2: 317030-321264 Arabidopsis thaliana
AT2G01720 1.0kb upstream 1.0kb upstream 1000 false Chr2: 320265-321264 Arabidopsis thaliana
AT2G01720 1.0kb downstream 1.0kb downstream 4235 true Chr2: 316030-320264 Arabidopsis thaliana
AT2G01720 1.0kb downstream 1.0kb downstream 1000 false Chr2: 316030-317029 Arabidopsis thaliana
AT2G01720 2.0kb upstream 2.0kb upstream 5235 true Chr2: 317030-322264 Arabidopsis thaliana
AT2G01720 2.0kb upstream 2.0kb upstream 2000 false Chr2: 320265-322264 Arabidopsis thaliana
AT2G01720 2.0kb downstream 2.0kb downstream 5235 true Chr2: 315030-320264 Arabidopsis thaliana
AT2G01720 2.0kb downstream 2.0kb downstream 2000 false Chr2: 315030-317029 Arabidopsis thaliana
AT2G01720 5.0kb upstream 5.0kb upstream 8235 true Chr2: 317030-325264 Arabidopsis thaliana
AT2G01720 5.0kb upstream 5.0kb upstream 5000 false Chr2: 320265-325264 Arabidopsis thaliana
AT2G01720 5.0kb downstream 5.0kb downstream 8235 true Chr2: 312030-320264 Arabidopsis thaliana
AT2G01720 5.0kb downstream 5.0kb downstream 5000 false Chr2: 312030-317029 Arabidopsis thaliana
AT2G01720 10.0kb upstream 10.0kb upstream 13235 true Chr2: 317030-330264 Arabidopsis thaliana
AT2G01720 10.0kb upstream 10.0kb upstream 10000 false Chr2: 320265-330264 Arabidopsis thaliana
AT2G01720 10.0kb downstream 10.0kb downstream 13235 true Chr2: 307030-320264 Arabidopsis thaliana
AT2G01720 10.0kb downstream 10.0kb downstream 10000 false Chr2: 307030-317029 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368155 5261 Brassicaceae View MSA
123839296 5264 Brassicales-Malvales View MSA
124338383 5266 SBM View MSA
124238095 5268 Malvidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.521        
cufflinks 24.345        
cufflinks 21.297       Low
cufflinks 28.7        
cufflinks 22.002       Low
cufflinks 28.988        

0 Strain