Gene : AT2G01740 A. thaliana TAIR10
Defline:  (1 of 18) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  74
Name:  ? AT2G01740 Secondary Identifier:  ? PAC:19640245
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01740 0.5kb upstream 0.5kb upstream 2180 true Chr2: 326136-328315 Arabidopsis thaliana
AT2G01740 0.5kb upstream 0.5kb upstream 500 false Chr2: 327816-328315 Arabidopsis thaliana
AT2G01740 0.5kb downstream 0.5kb downstream 2180 true Chr2: 325636-327815 Arabidopsis thaliana
AT2G01740 0.5kb downstream 0.5kb downstream 500 false Chr2: 325636-326135 Arabidopsis thaliana
AT2G01740 1.0kb upstream 1.0kb upstream 2680 true Chr2: 326136-328815 Arabidopsis thaliana
AT2G01740 1.0kb upstream 1.0kb upstream 1000 false Chr2: 327816-328815 Arabidopsis thaliana
AT2G01740 1.0kb downstream 1.0kb downstream 2680 true Chr2: 325136-327815 Arabidopsis thaliana
AT2G01740 1.0kb downstream 1.0kb downstream 1000 false Chr2: 325136-326135 Arabidopsis thaliana
AT2G01740 2.0kb upstream 2.0kb upstream 3680 true Chr2: 326136-329815 Arabidopsis thaliana
AT2G01740 2.0kb upstream 2.0kb upstream 2000 false Chr2: 327816-329815 Arabidopsis thaliana
AT2G01740 2.0kb downstream 2.0kb downstream 3680 true Chr2: 324136-327815 Arabidopsis thaliana
AT2G01740 2.0kb downstream 2.0kb downstream 2000 false Chr2: 324136-326135 Arabidopsis thaliana
AT2G01740 5.0kb upstream 5.0kb upstream 6680 true Chr2: 326136-332815 Arabidopsis thaliana
AT2G01740 5.0kb upstream 5.0kb upstream 5000 false Chr2: 327816-332815 Arabidopsis thaliana
AT2G01740 5.0kb downstream 5.0kb downstream 6680 true Chr2: 321136-327815 Arabidopsis thaliana
AT2G01740 5.0kb downstream 5.0kb downstream 5000 false Chr2: 321136-326135 Arabidopsis thaliana
AT2G01740 10.0kb upstream 10.0kb upstream 11680 true Chr2: 326136-337815 Arabidopsis thaliana
AT2G01740 10.0kb upstream 10.0kb upstream 10000 false Chr2: 327816-337815 Arabidopsis thaliana
AT2G01740 10.0kb downstream 10.0kb downstream 11680 true Chr2: 316136-327815 Arabidopsis thaliana
AT2G01740 10.0kb downstream 10.0kb downstream 10000 false Chr2: 316136-326135 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364405 5261 Brassicaceae View MSA
123841471 5264 Brassicales-Malvales View MSA
124322938 5266 SBM View MSA
124244790 5268 Malvidae View MSA
124069371 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.727        
cufflinks 1.721        
cufflinks 1.196       Low
cufflinks 2.008       High
cufflinks 1.074       Low
cufflinks 1.83        

0 Strain