Gene : GPX1 A. thaliana TAIR10
Primary Identifier:  ? AT2G25080 Defline:  (1 of 2) PTHR11592:SF11 - PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC-RELATED
Genomic Order:  1775 Name:  ? AT2G25080
Secondary Identifier:  ? PAC:19639809
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25080 0.5kb upstream 0.5kb upstream 2471 true Chr2: 10667549-10670019 Arabidopsis thaliana
AT2G25080 0.5kb upstream 0.5kb upstream 500 false Chr2: 10667549-10668048 Arabidopsis thaliana
AT2G25080 0.5kb downstream 0.5kb downstream 2471 true Chr2: 10668049-10670519 Arabidopsis thaliana
AT2G25080 0.5kb downstream 0.5kb downstream 500 false Chr2: 10670020-10670519 Arabidopsis thaliana
AT2G25080 1.0kb upstream 1.0kb upstream 2971 true Chr2: 10667049-10670019 Arabidopsis thaliana
AT2G25080 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10667049-10668048 Arabidopsis thaliana
AT2G25080 1.0kb downstream 1.0kb downstream 2971 true Chr2: 10668049-10671019 Arabidopsis thaliana
AT2G25080 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10670020-10671019 Arabidopsis thaliana
AT2G25080 2.0kb upstream 2.0kb upstream 3971 true Chr2: 10666049-10670019 Arabidopsis thaliana
AT2G25080 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10666049-10668048 Arabidopsis thaliana
AT2G25080 2.0kb downstream 2.0kb downstream 3971 true Chr2: 10668049-10672019 Arabidopsis thaliana
AT2G25080 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10670020-10672019 Arabidopsis thaliana
AT2G25080 5.0kb upstream 5.0kb upstream 6971 true Chr2: 10663049-10670019 Arabidopsis thaliana
AT2G25080 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10663049-10668048 Arabidopsis thaliana
AT2G25080 5.0kb downstream 5.0kb downstream 6971 true Chr2: 10668049-10675019 Arabidopsis thaliana
AT2G25080 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10670020-10675019 Arabidopsis thaliana
AT2G25080 10.0kb upstream 10.0kb upstream 11971 true Chr2: 10658049-10670019 Arabidopsis thaliana
AT2G25080 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10658049-10668048 Arabidopsis thaliana
AT2G25080 10.0kb downstream 10.0kb downstream 11971 true Chr2: 10668049-10680019 Arabidopsis thaliana
AT2G25080 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10670020-10680019 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374017 5261 Brassicaceae View MSA
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.846     High  
cufflinks 14.569        
cufflinks 163.549     High High
cufflinks 16.837        
cufflinks 175.214     High High
cufflinks 10.784       Low

0 Strain