Gene : TIC55-II A. thaliana TAIR10
Primary Identifier:  ? AT2G24820 Defline:  (1 of 1) PTHR21266//PTHR21266:SF29 - IRON-SULFUR DOMAIN CONTAINING PROTEIN // PROTEIN TIC 55, CHLOROPLASTIC
Genomic Order:  1754 Name:  ? AT2G24820
Secondary Identifier:  ? PAC:19643456
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5098 Arabidopsis thaliana pathologic  
Athaliana PWY-6927 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24820 0.5kb upstream 0.5kb upstream 2460 true Chr2: 10574479-10576938 Arabidopsis thaliana
AT2G24820 0.5kb upstream 0.5kb upstream 500 false Chr2: 10574479-10574978 Arabidopsis thaliana
AT2G24820 0.5kb downstream 0.5kb downstream 2460 true Chr2: 10574979-10577438 Arabidopsis thaliana
AT2G24820 0.5kb downstream 0.5kb downstream 500 false Chr2: 10576939-10577438 Arabidopsis thaliana
AT2G24820 1.0kb upstream 1.0kb upstream 2960 true Chr2: 10573979-10576938 Arabidopsis thaliana
AT2G24820 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10573979-10574978 Arabidopsis thaliana
AT2G24820 1.0kb downstream 1.0kb downstream 2960 true Chr2: 10574979-10577938 Arabidopsis thaliana
AT2G24820 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10576939-10577938 Arabidopsis thaliana
AT2G24820 2.0kb upstream 2.0kb upstream 3960 true Chr2: 10572979-10576938 Arabidopsis thaliana
AT2G24820 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10572979-10574978 Arabidopsis thaliana
AT2G24820 2.0kb downstream 2.0kb downstream 3960 true Chr2: 10574979-10578938 Arabidopsis thaliana
AT2G24820 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10576939-10578938 Arabidopsis thaliana
AT2G24820 5.0kb upstream 5.0kb upstream 6960 true Chr2: 10569979-10576938 Arabidopsis thaliana
AT2G24820 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10569979-10574978 Arabidopsis thaliana
AT2G24820 5.0kb downstream 5.0kb downstream 6960 true Chr2: 10574979-10581938 Arabidopsis thaliana
AT2G24820 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10576939-10581938 Arabidopsis thaliana
AT2G24820 10.0kb upstream 10.0kb upstream 11960 true Chr2: 10564979-10576938 Arabidopsis thaliana
AT2G24820 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10564979-10574978 Arabidopsis thaliana
AT2G24820 10.0kb downstream 10.0kb downstream 11960 true Chr2: 10574979-10586938 Arabidopsis thaliana
AT2G24820 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10576939-10586938 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370406 5261 Brassicaceae View MSA
123833788 5264 Brassicales-Malvales View MSA
124343991 5266 SBM View MSA
124246740 5268 Malvidae View MSA
124068769 5270 Rosid View MSA
123736792 5271 Pentapetalae View MSA
122790775 5272 Eudicot View MSA
122046854 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121343903 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.871     High  
cufflinks 1.387        
cufflinks 60.503     High  
cufflinks 1.755        
cufflinks 56.651     High  
cufflinks 0.443       Low

0 Strain