Gene : AT2G31940 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11527//PTHR11527:SF161 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  2502
Name:  ? AT2G31940 Secondary Identifier:  ? PAC:19642666
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G31940 0.5kb upstream 0.5kb upstream 1013 true Chr2: 13580100-13581112 Arabidopsis thaliana
AT2G31940 0.5kb upstream 0.5kb upstream 500 false Chr2: 13580100-13580599 Arabidopsis thaliana
AT2G31940 0.5kb downstream 0.5kb downstream 1013 true Chr2: 13580600-13581612 Arabidopsis thaliana
AT2G31940 0.5kb downstream 0.5kb downstream 500 false Chr2: 13581113-13581612 Arabidopsis thaliana
AT2G31940 1.0kb upstream 1.0kb upstream 1513 true Chr2: 13579600-13581112 Arabidopsis thaliana
AT2G31940 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13579600-13580599 Arabidopsis thaliana
AT2G31940 1.0kb downstream 1.0kb downstream 1513 true Chr2: 13580600-13582112 Arabidopsis thaliana
AT2G31940 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13581113-13582112 Arabidopsis thaliana
AT2G31940 2.0kb upstream 2.0kb upstream 2513 true Chr2: 13578600-13581112 Arabidopsis thaliana
AT2G31940 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13578600-13580599 Arabidopsis thaliana
AT2G31940 2.0kb downstream 2.0kb downstream 2513 true Chr2: 13580600-13583112 Arabidopsis thaliana
AT2G31940 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13581113-13583112 Arabidopsis thaliana
AT2G31940 5.0kb upstream 5.0kb upstream 5513 true Chr2: 13575600-13581112 Arabidopsis thaliana
AT2G31940 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13575600-13580599 Arabidopsis thaliana
AT2G31940 5.0kb downstream 5.0kb downstream 5513 true Chr2: 13580600-13586112 Arabidopsis thaliana
AT2G31940 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13581113-13586112 Arabidopsis thaliana
AT2G31940 10.0kb upstream 10.0kb upstream 10513 true Chr2: 13570600-13581112 Arabidopsis thaliana
AT2G31940 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13570600-13580599 Arabidopsis thaliana
AT2G31940 10.0kb downstream 10.0kb downstream 10513 true Chr2: 13580600-13591112 Arabidopsis thaliana
AT2G31940 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13581113-13591112 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374333 5261 Brassicaceae View MSA
123800734 5264 Brassicales-Malvales View MSA
124298108 5266 SBM View MSA
124250112 5268 Malvidae View MSA
124060649 5270 Rosid View MSA
123750767 5271 Pentapetalae View MSA
122796138 5272 Eudicot View MSA
122051041 5273 Angiosperm View MSA
121312263 5274 Embryophyte View MSA
123349452 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.272        
cufflinks 3.481        
cufflinks 1.228        
cufflinks 7.173       High
cufflinks 0.841       Low
cufflinks 2.197        

0 Strain