Gene : AT2G24550 A. thaliana TAIR10
Defline:  (1 of 9) KOG4210 - Nuclear localization sequence binding protein Genomic Order:  1720
Name:  ? AT2G24550 Secondary Identifier:  ? PAC:19638985
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G24550 0.5kb upstream 0.5kb upstream 1867 true Chr2: 10427856-10429722 Arabidopsis thaliana
AT2G24550 0.5kb upstream 0.5kb upstream 500 false Chr2: 10429223-10429722 Arabidopsis thaliana
AT2G24550 0.5kb downstream 0.5kb downstream 1867 true Chr2: 10427356-10429222 Arabidopsis thaliana
AT2G24550 0.5kb downstream 0.5kb downstream 500 false Chr2: 10427356-10427855 Arabidopsis thaliana
AT2G24550 1.0kb upstream 1.0kb upstream 2367 true Chr2: 10427856-10430222 Arabidopsis thaliana
AT2G24550 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10429223-10430222 Arabidopsis thaliana
AT2G24550 1.0kb downstream 1.0kb downstream 2367 true Chr2: 10426856-10429222 Arabidopsis thaliana
AT2G24550 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10426856-10427855 Arabidopsis thaliana
AT2G24550 2.0kb upstream 2.0kb upstream 3367 true Chr2: 10427856-10431222 Arabidopsis thaliana
AT2G24550 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10429223-10431222 Arabidopsis thaliana
AT2G24550 2.0kb downstream 2.0kb downstream 3367 true Chr2: 10425856-10429222 Arabidopsis thaliana
AT2G24550 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10425856-10427855 Arabidopsis thaliana
AT2G24550 5.0kb upstream 5.0kb upstream 6367 true Chr2: 10427856-10434222 Arabidopsis thaliana
AT2G24550 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10429223-10434222 Arabidopsis thaliana
AT2G24550 5.0kb downstream 5.0kb downstream 6367 true Chr2: 10422856-10429222 Arabidopsis thaliana
AT2G24550 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10422856-10427855 Arabidopsis thaliana
AT2G24550 10.0kb upstream 10.0kb upstream 11367 true Chr2: 10427856-10439222 Arabidopsis thaliana
AT2G24550 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10429223-10439222 Arabidopsis thaliana
AT2G24550 10.0kb downstream 10.0kb downstream 11367 true Chr2: 10417856-10429222 Arabidopsis thaliana
AT2G24550 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10417856-10427855 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374494 5261 Brassicaceae View MSA
123839784 5264 Brassicales-Malvales View MSA
124339869 5266 SBM View MSA
124240217 5268 Malvidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.521     High Low
cufflinks 97.065     High  
cufflinks 83.365     High  
cufflinks 114.287     High High
cufflinks 85.162     High  
cufflinks 101.528     High  

0 Strain