Gene : AT2G23940 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13505:SF7 - TRANSMEMBRANE PROTEIN 208 Genomic Order:  1655
Name:  ? AT2G23940 Secondary Identifier:  ? PAC:19640233
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G23940 0.5kb upstream 0.5kb upstream 1866 true Chr2: 10183466-10185331 Arabidopsis thaliana
AT2G23940 0.5kb upstream 0.5kb upstream 500 false Chr2: 10183466-10183965 Arabidopsis thaliana
AT2G23940 0.5kb downstream 0.5kb downstream 1866 true Chr2: 10183966-10185831 Arabidopsis thaliana
AT2G23940 0.5kb downstream 0.5kb downstream 500 false Chr2: 10185332-10185831 Arabidopsis thaliana
AT2G23940 1.0kb upstream 1.0kb upstream 2366 true Chr2: 10182966-10185331 Arabidopsis thaliana
AT2G23940 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10182966-10183965 Arabidopsis thaliana
AT2G23940 1.0kb downstream 1.0kb downstream 2366 true Chr2: 10183966-10186331 Arabidopsis thaliana
AT2G23940 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10185332-10186331 Arabidopsis thaliana
AT2G23940 2.0kb upstream 2.0kb upstream 3366 true Chr2: 10181966-10185331 Arabidopsis thaliana
AT2G23940 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10181966-10183965 Arabidopsis thaliana
AT2G23940 2.0kb downstream 2.0kb downstream 3366 true Chr2: 10183966-10187331 Arabidopsis thaliana
AT2G23940 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10185332-10187331 Arabidopsis thaliana
AT2G23940 5.0kb upstream 5.0kb upstream 6366 true Chr2: 10178966-10185331 Arabidopsis thaliana
AT2G23940 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10178966-10183965 Arabidopsis thaliana
AT2G23940 5.0kb downstream 5.0kb downstream 6366 true Chr2: 10183966-10190331 Arabidopsis thaliana
AT2G23940 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10185332-10190331 Arabidopsis thaliana
AT2G23940 10.0kb upstream 10.0kb upstream 11366 true Chr2: 10173966-10185331 Arabidopsis thaliana
AT2G23940 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10173966-10183965 Arabidopsis thaliana
AT2G23940 10.0kb downstream 10.0kb downstream 11366 true Chr2: 10183966-10195331 Arabidopsis thaliana
AT2G23940 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10185332-10195331 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366045 5261 Brassicaceae View MSA
123831766 5264 Brassicales-Malvales View MSA
124344417 5266 SBM View MSA
124240530 5268 Malvidae View MSA
124065842 5270 Rosid View MSA
123736795 5271 Pentapetalae View MSA
122789495 5272 Eudicot View MSA
122042916 5273 Angiosperm View MSA
121345571 5274 Embryophyte View MSA
123425325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9        
cufflinks 15.465        
cufflinks 12.005       Low
cufflinks 16.938       High
cufflinks 11.49       Low
cufflinks 15.468        

0 Strain