Gene : HB6 A. thaliana TAIR10
Primary Identifier:  ? AT2G22430 Defline:  (1 of 3) PTHR24326//PTHR24326:SF196 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-16-RELATED
Genomic Order:  1503 Name:  ? AT2G22430
Secondary Identifier:  ? PAC:19641101
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G22430 0.5kb upstream 0.5kb upstream 2236 true Chr2: 9526095-9528330 Arabidopsis thaliana
AT2G22430 0.5kb upstream 0.5kb upstream 500 false Chr2: 9527831-9528330 Arabidopsis thaliana
AT2G22430 0.5kb downstream 0.5kb downstream 2236 true Chr2: 9525595-9527830 Arabidopsis thaliana
AT2G22430 0.5kb downstream 0.5kb downstream 500 false Chr2: 9525595-9526094 Arabidopsis thaliana
AT2G22430 1.0kb upstream 1.0kb upstream 2736 true Chr2: 9526095-9528830 Arabidopsis thaliana
AT2G22430 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9527831-9528830 Arabidopsis thaliana
AT2G22430 1.0kb downstream 1.0kb downstream 2736 true Chr2: 9525095-9527830 Arabidopsis thaliana
AT2G22430 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9525095-9526094 Arabidopsis thaliana
AT2G22430 2.0kb upstream 2.0kb upstream 3736 true Chr2: 9526095-9529830 Arabidopsis thaliana
AT2G22430 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9527831-9529830 Arabidopsis thaliana
AT2G22430 2.0kb downstream 2.0kb downstream 3736 true Chr2: 9524095-9527830 Arabidopsis thaliana
AT2G22430 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9524095-9526094 Arabidopsis thaliana
AT2G22430 5.0kb upstream 5.0kb upstream 6736 true Chr2: 9526095-9532830 Arabidopsis thaliana
AT2G22430 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9527831-9532830 Arabidopsis thaliana
AT2G22430 5.0kb downstream 5.0kb downstream 6736 true Chr2: 9521095-9527830 Arabidopsis thaliana
AT2G22430 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9521095-9526094 Arabidopsis thaliana
AT2G22430 10.0kb upstream 10.0kb upstream 11736 true Chr2: 9526095-9537830 Arabidopsis thaliana
AT2G22430 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9527831-9537830 Arabidopsis thaliana
AT2G22430 10.0kb downstream 10.0kb downstream 11736 true Chr2: 9516095-9527830 Arabidopsis thaliana
AT2G22430 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9516095-9526094 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367358 5261 Brassicaceae View MSA
123831293 5264 Brassicales-Malvales View MSA
124351639 5266 SBM View MSA
124253703 5268 Malvidae View MSA
124072423 5270 Rosid View MSA
123750844 5271 Pentapetalae View MSA
122791201 5272 Eudicot View MSA
122049195 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 192.501     High  
cufflinks 176.453     High  
cufflinks 118.461     High Low
cufflinks 194.013     High  
cufflinks 121.699     High Low
cufflinks 206.293     High  

0 Strain