Gene : AT2G22600 A. thaliana TAIR10
Defline:  (1 of 1) PF00013//PF13014 - KH domain (KH_1) // KH domain (KH_3) Genomic Order:  1519
Name:  ? AT2G22600 Secondary Identifier:  ? PAC:19638202
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G22600 0.5kb upstream 0.5kb upstream 2934 true Chr2: 9596117-9599050 Arabidopsis thaliana
AT2G22600 0.5kb upstream 0.5kb upstream 500 false Chr2: 9596117-9596616 Arabidopsis thaliana
AT2G22600 0.5kb downstream 0.5kb downstream 2934 true Chr2: 9596617-9599550 Arabidopsis thaliana
AT2G22600 0.5kb downstream 0.5kb downstream 500 false Chr2: 9599051-9599550 Arabidopsis thaliana
AT2G22600 1.0kb upstream 1.0kb upstream 3434 true Chr2: 9595617-9599050 Arabidopsis thaliana
AT2G22600 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9595617-9596616 Arabidopsis thaliana
AT2G22600 1.0kb downstream 1.0kb downstream 3434 true Chr2: 9596617-9600050 Arabidopsis thaliana
AT2G22600 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9599051-9600050 Arabidopsis thaliana
AT2G22600 2.0kb upstream 2.0kb upstream 4434 true Chr2: 9594617-9599050 Arabidopsis thaliana
AT2G22600 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9594617-9596616 Arabidopsis thaliana
AT2G22600 2.0kb downstream 2.0kb downstream 4434 true Chr2: 9596617-9601050 Arabidopsis thaliana
AT2G22600 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9599051-9601050 Arabidopsis thaliana
AT2G22600 5.0kb upstream 5.0kb upstream 7434 true Chr2: 9591617-9599050 Arabidopsis thaliana
AT2G22600 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9591617-9596616 Arabidopsis thaliana
AT2G22600 5.0kb downstream 5.0kb downstream 7434 true Chr2: 9596617-9604050 Arabidopsis thaliana
AT2G22600 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9599051-9604050 Arabidopsis thaliana
AT2G22600 10.0kb upstream 10.0kb upstream 12434 true Chr2: 9586617-9599050 Arabidopsis thaliana
AT2G22600 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9586617-9596616 Arabidopsis thaliana
AT2G22600 10.0kb downstream 10.0kb downstream 12434 true Chr2: 9596617-9609050 Arabidopsis thaliana
AT2G22600 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9599051-9609050 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363340 5261 Brassicaceae View MSA
123831434 5264 Brassicales-Malvales View MSA
124321727 5266 SBM View MSA
124247686 5268 Malvidae View MSA
124070518 5270 Rosid View MSA
123744817 5271 Pentapetalae View MSA
122797103 5272 Eudicot View MSA
122049280 5273 Angiosperm View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.153     Low  
cufflinks 0.286     Low  
cufflinks 0.126     Low Low
cufflinks 0.547       High
cufflinks 0.154     Low  
cufflinks 0.469       High

0 Strain