Gene : AT2G22170 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31718//PTHR31718:SF0 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED Genomic Order:  1478
Name:  ? AT2G22170 Secondary Identifier:  ? PAC:19638625
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G22170 0.5kb upstream 0.5kb upstream 1469 true Chr2: 9426849-9428317 Arabidopsis thaliana
AT2G22170 0.5kb upstream 0.5kb upstream 500 false Chr2: 9427818-9428317 Arabidopsis thaliana
AT2G22170 0.5kb downstream 0.5kb downstream 1469 true Chr2: 9426349-9427817 Arabidopsis thaliana
AT2G22170 0.5kb downstream 0.5kb downstream 500 false Chr2: 9426349-9426848 Arabidopsis thaliana
AT2G22170 1.0kb upstream 1.0kb upstream 1969 true Chr2: 9426849-9428817 Arabidopsis thaliana
AT2G22170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9427818-9428817 Arabidopsis thaliana
AT2G22170 1.0kb downstream 1.0kb downstream 1969 true Chr2: 9425849-9427817 Arabidopsis thaliana
AT2G22170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9425849-9426848 Arabidopsis thaliana
AT2G22170 2.0kb upstream 2.0kb upstream 2969 true Chr2: 9426849-9429817 Arabidopsis thaliana
AT2G22170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9427818-9429817 Arabidopsis thaliana
AT2G22170 2.0kb downstream 2.0kb downstream 2969 true Chr2: 9424849-9427817 Arabidopsis thaliana
AT2G22170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9424849-9426848 Arabidopsis thaliana
AT2G22170 5.0kb upstream 5.0kb upstream 5969 true Chr2: 9426849-9432817 Arabidopsis thaliana
AT2G22170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9427818-9432817 Arabidopsis thaliana
AT2G22170 5.0kb downstream 5.0kb downstream 5969 true Chr2: 9421849-9427817 Arabidopsis thaliana
AT2G22170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9421849-9426848 Arabidopsis thaliana
AT2G22170 10.0kb upstream 10.0kb upstream 10969 true Chr2: 9426849-9437817 Arabidopsis thaliana
AT2G22170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9427818-9437817 Arabidopsis thaliana
AT2G22170 10.0kb downstream 10.0kb downstream 10969 true Chr2: 9416849-9427817 Arabidopsis thaliana
AT2G22170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9416849-9426848 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364478 5261 Brassicaceae View MSA
123838840 5264 Brassicales-Malvales View MSA
124342164 5266 SBM View MSA
124247430 5268 Malvidae View MSA
124065222 5270 Rosid View MSA
123742861 5271 Pentapetalae View MSA
122790879 5272 Eudicot View MSA
122048242 5273 Angiosperm View MSA
121351079 5274 Embryophyte View MSA
123381999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.804     High Low
cufflinks 139.176     High  
cufflinks 51.348     High  
cufflinks 103.37     High  
cufflinks 33.319     High Low
cufflinks 171.469     High High

0 Strain