Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-1081 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT2G21610 0.5kb upstream | 0.5kb | upstream | 2365 | true | Chr2: 9245161-9247525 | Arabidopsis thaliana |
AT2G21610 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr2: 9247026-9247525 | Arabidopsis thaliana |
AT2G21610 0.5kb downstream | 0.5kb | downstream | 2365 | true | Chr2: 9244661-9247025 | Arabidopsis thaliana |
AT2G21610 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr2: 9244661-9245160 | Arabidopsis thaliana |
AT2G21610 1.0kb upstream | 1.0kb | upstream | 2865 | true | Chr2: 9245161-9248025 | Arabidopsis thaliana |
AT2G21610 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr2: 9247026-9248025 | Arabidopsis thaliana |
AT2G21610 1.0kb downstream | 1.0kb | downstream | 2865 | true | Chr2: 9244161-9247025 | Arabidopsis thaliana |
AT2G21610 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr2: 9244161-9245160 | Arabidopsis thaliana |
AT2G21610 2.0kb upstream | 2.0kb | upstream | 3865 | true | Chr2: 9245161-9249025 | Arabidopsis thaliana |
AT2G21610 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr2: 9247026-9249025 | Arabidopsis thaliana |
AT2G21610 2.0kb downstream | 2.0kb | downstream | 3865 | true | Chr2: 9243161-9247025 | Arabidopsis thaliana |
AT2G21610 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr2: 9243161-9245160 | Arabidopsis thaliana |
AT2G21610 5.0kb upstream | 5.0kb | upstream | 6865 | true | Chr2: 9245161-9252025 | Arabidopsis thaliana |
AT2G21610 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr2: 9247026-9252025 | Arabidopsis thaliana |
AT2G21610 5.0kb downstream | 5.0kb | downstream | 6865 | true | Chr2: 9240161-9247025 | Arabidopsis thaliana |
AT2G21610 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr2: 9240161-9245160 | Arabidopsis thaliana |
AT2G21610 10.0kb upstream | 10.0kb | upstream | 11865 | true | Chr2: 9245161-9257025 | Arabidopsis thaliana |
AT2G21610 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr2: 9247026-9257025 | Arabidopsis thaliana |
AT2G21610 10.0kb downstream | 10.0kb | downstream | 11865 | true | Chr2: 9235161-9247025 | Arabidopsis thaliana |
AT2G21610 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr2: 9235161-9245160 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122362466 | 5261 | Brassicaceae | View MSA |
123839832 | 5264 | Brassicales-Malvales | View MSA |
124346446 | 5266 | SBM | View MSA |
124241486 | 5268 | Malvidae | View MSA |
124072507 | 5270 | Rosid | View MSA |
123749386 | 5271 | Pentapetalae | View MSA |
122794986 | 5272 | Eudicot | View MSA |
122041979 | 5273 | Angiosperm | View MSA |
121350573 | 5274 | Embryophyte | View MSA |
123381802 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.09 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.225 | Low | |||
cufflinks | 0.009 | Low | Low | ||
cufflinks | 0.229 | Low |