Gene : BPC4 A. thaliana TAIR10
Primary Identifier:  ? AT2G21240 Defline:  (1 of 2) PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED
Genomic Order:  1384 Name:  ? AT2G21240
Secondary Identifier:  ? PAC:19640149
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G21240 0.5kb upstream 0.5kb upstream 2238 true Chr2: 9101313-9103550 Arabidopsis thaliana
AT2G21240 0.5kb upstream 0.5kb upstream 500 false Chr2: 9103051-9103550 Arabidopsis thaliana
AT2G21240 0.5kb downstream 0.5kb downstream 2238 true Chr2: 9100813-9103050 Arabidopsis thaliana
AT2G21240 0.5kb downstream 0.5kb downstream 500 false Chr2: 9100813-9101312 Arabidopsis thaliana
AT2G21240 1.0kb upstream 1.0kb upstream 2738 true Chr2: 9101313-9104050 Arabidopsis thaliana
AT2G21240 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9103051-9104050 Arabidopsis thaliana
AT2G21240 1.0kb downstream 1.0kb downstream 2738 true Chr2: 9100313-9103050 Arabidopsis thaliana
AT2G21240 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9100313-9101312 Arabidopsis thaliana
AT2G21240 2.0kb upstream 2.0kb upstream 3738 true Chr2: 9101313-9105050 Arabidopsis thaliana
AT2G21240 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9103051-9105050 Arabidopsis thaliana
AT2G21240 2.0kb downstream 2.0kb downstream 3738 true Chr2: 9099313-9103050 Arabidopsis thaliana
AT2G21240 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9099313-9101312 Arabidopsis thaliana
AT2G21240 5.0kb upstream 5.0kb upstream 6738 true Chr2: 9101313-9108050 Arabidopsis thaliana
AT2G21240 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9103051-9108050 Arabidopsis thaliana
AT2G21240 5.0kb downstream 5.0kb downstream 6738 true Chr2: 9096313-9103050 Arabidopsis thaliana
AT2G21240 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9096313-9101312 Arabidopsis thaliana
AT2G21240 10.0kb upstream 10.0kb upstream 11738 true Chr2: 9101313-9113050 Arabidopsis thaliana
AT2G21240 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9103051-9113050 Arabidopsis thaliana
AT2G21240 10.0kb downstream 10.0kb downstream 11738 true Chr2: 9091313-9103050 Arabidopsis thaliana
AT2G21240 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9091313-9101312 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363498 5261 Brassicaceae View MSA
123838572 5264 Brassicales-Malvales View MSA
124337369 5266 SBM View MSA
124244703 5268 Malvidae View MSA
124062231 5270 Rosid View MSA
123743599 5271 Pentapetalae View MSA
122787998 5272 Eudicot View MSA
122045937 5273 Angiosperm View MSA
121350358 5274 Embryophyte View MSA
123381694 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.552       High
cufflinks 11.384        
cufflinks 11.071       Low
cufflinks 11.975        
cufflinks 12.412       High
cufflinks 11.064       Low

0 Strain