Gene : AT2G21080 A. thaliana TAIR10
Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  1364
Name:  ? AT2G21080 Secondary Identifier:  ? PAC:19640161
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G21080 0.5kb upstream 0.5kb upstream 2191 true Chr2: 9043199-9045389 Arabidopsis thaliana
AT2G21080 0.5kb upstream 0.5kb upstream 500 false Chr2: 9043199-9043698 Arabidopsis thaliana
AT2G21080 0.5kb downstream 0.5kb downstream 2191 true Chr2: 9043699-9045889 Arabidopsis thaliana
AT2G21080 0.5kb downstream 0.5kb downstream 500 false Chr2: 9045390-9045889 Arabidopsis thaliana
AT2G21080 1.0kb upstream 1.0kb upstream 2691 true Chr2: 9042699-9045389 Arabidopsis thaliana
AT2G21080 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9042699-9043698 Arabidopsis thaliana
AT2G21080 1.0kb downstream 1.0kb downstream 2691 true Chr2: 9043699-9046389 Arabidopsis thaliana
AT2G21080 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9045390-9046389 Arabidopsis thaliana
AT2G21080 2.0kb upstream 2.0kb upstream 3691 true Chr2: 9041699-9045389 Arabidopsis thaliana
AT2G21080 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9041699-9043698 Arabidopsis thaliana
AT2G21080 2.0kb downstream 2.0kb downstream 3691 true Chr2: 9043699-9047389 Arabidopsis thaliana
AT2G21080 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9045390-9047389 Arabidopsis thaliana
AT2G21080 5.0kb upstream 5.0kb upstream 6691 true Chr2: 9038699-9045389 Arabidopsis thaliana
AT2G21080 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9038699-9043698 Arabidopsis thaliana
AT2G21080 5.0kb downstream 5.0kb downstream 6691 true Chr2: 9043699-9050389 Arabidopsis thaliana
AT2G21080 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9045390-9050389 Arabidopsis thaliana
AT2G21080 10.0kb upstream 10.0kb upstream 11691 true Chr2: 9033699-9045389 Arabidopsis thaliana
AT2G21080 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9033699-9043698 Arabidopsis thaliana
AT2G21080 10.0kb downstream 10.0kb downstream 11691 true Chr2: 9043699-9055389 Arabidopsis thaliana
AT2G21080 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9045390-9055389 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343660 5261 Brassicaceae View MSA
123829561 5264 Brassicales-Malvales View MSA
124339488 5266 SBM View MSA
124239574 5268 Malvidae View MSA
124073555 5270 Rosid View MSA
123741575 5271 Pentapetalae View MSA
122793789 5272 Eudicot View MSA
122045087 5273 Angiosperm View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.173        
cufflinks 4.166        
cufflinks 2.807        
cufflinks 4.335        
cufflinks 1.737       Low
cufflinks 3.43        

0 Strain