Gene : AT2G20590 A. thaliana TAIR10
Defline:  (1 of 25) PTHR10994 - RETICULON Genomic Order:  1303
Name:  ? AT2G20590 Secondary Identifier:  ? PAC:19639022
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20590 0.5kb upstream 0.5kb upstream 2640 true Chr2: 8867117-8869756 Arabidopsis thaliana
AT2G20590 0.5kb upstream 0.5kb upstream 500 false Chr2: 8869257-8869756 Arabidopsis thaliana
AT2G20590 0.5kb downstream 0.5kb downstream 2640 true Chr2: 8866617-8869256 Arabidopsis thaliana
AT2G20590 0.5kb downstream 0.5kb downstream 500 false Chr2: 8866617-8867116 Arabidopsis thaliana
AT2G20590 1.0kb upstream 1.0kb upstream 3140 true Chr2: 8867117-8870256 Arabidopsis thaliana
AT2G20590 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8869257-8870256 Arabidopsis thaliana
AT2G20590 1.0kb downstream 1.0kb downstream 3140 true Chr2: 8866117-8869256 Arabidopsis thaliana
AT2G20590 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8866117-8867116 Arabidopsis thaliana
AT2G20590 2.0kb upstream 2.0kb upstream 4140 true Chr2: 8867117-8871256 Arabidopsis thaliana
AT2G20590 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8869257-8871256 Arabidopsis thaliana
AT2G20590 2.0kb downstream 2.0kb downstream 4140 true Chr2: 8865117-8869256 Arabidopsis thaliana
AT2G20590 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8865117-8867116 Arabidopsis thaliana
AT2G20590 5.0kb upstream 5.0kb upstream 7140 true Chr2: 8867117-8874256 Arabidopsis thaliana
AT2G20590 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8869257-8874256 Arabidopsis thaliana
AT2G20590 5.0kb downstream 5.0kb downstream 7140 true Chr2: 8862117-8869256 Arabidopsis thaliana
AT2G20590 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8862117-8867116 Arabidopsis thaliana
AT2G20590 10.0kb upstream 10.0kb upstream 12140 true Chr2: 8867117-8879256 Arabidopsis thaliana
AT2G20590 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8869257-8879256 Arabidopsis thaliana
AT2G20590 10.0kb downstream 10.0kb downstream 12140 true Chr2: 8857117-8869256 Arabidopsis thaliana
AT2G20590 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8857117-8867116 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381114 5261 Brassicaceae View MSA
123830467 5264 Brassicales-Malvales View MSA
124345713 5266 SBM View MSA
124243328 5268 Malvidae View MSA
124065493 5270 Rosid View MSA
123740273 5271 Pentapetalae View MSA
122786766 5272 Eudicot View MSA
122045341 5273 Angiosperm View MSA
121349821 5274 Embryophyte View MSA
123424485 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.038        
cufflinks 2.417        
cufflinks 0.451       Low
cufflinks 1.697        
cufflinks 0.423       Low
cufflinks 3.023       High

0 Strain