Gene : AT2G20230 A. thaliana TAIR10
Defline:  (1 of 2) PTHR19282:SF227 - TETRASPANIN-18-RELATED Genomic Order:  1260
Name:  ? AT2G20230 Secondary Identifier:  ? PAC:19643566
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20230 0.5kb upstream 0.5kb upstream 2702 true Chr2: 8725041-8727742 Arabidopsis thaliana
AT2G20230 0.5kb upstream 0.5kb upstream 500 false Chr2: 8725041-8725540 Arabidopsis thaliana
AT2G20230 0.5kb downstream 0.5kb downstream 2702 true Chr2: 8725541-8728242 Arabidopsis thaliana
AT2G20230 0.5kb downstream 0.5kb downstream 500 false Chr2: 8727743-8728242 Arabidopsis thaliana
AT2G20230 1.0kb upstream 1.0kb upstream 3202 true Chr2: 8724541-8727742 Arabidopsis thaliana
AT2G20230 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8724541-8725540 Arabidopsis thaliana
AT2G20230 1.0kb downstream 1.0kb downstream 3202 true Chr2: 8725541-8728742 Arabidopsis thaliana
AT2G20230 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8727743-8728742 Arabidopsis thaliana
AT2G20230 2.0kb upstream 2.0kb upstream 4202 true Chr2: 8723541-8727742 Arabidopsis thaliana
AT2G20230 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8723541-8725540 Arabidopsis thaliana
AT2G20230 2.0kb downstream 2.0kb downstream 4202 true Chr2: 8725541-8729742 Arabidopsis thaliana
AT2G20230 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8727743-8729742 Arabidopsis thaliana
AT2G20230 5.0kb upstream 5.0kb upstream 7202 true Chr2: 8720541-8727742 Arabidopsis thaliana
AT2G20230 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8720541-8725540 Arabidopsis thaliana
AT2G20230 5.0kb downstream 5.0kb downstream 7202 true Chr2: 8725541-8732742 Arabidopsis thaliana
AT2G20230 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8727743-8732742 Arabidopsis thaliana
AT2G20230 10.0kb upstream 10.0kb upstream 12202 true Chr2: 8715541-8727742 Arabidopsis thaliana
AT2G20230 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8715541-8725540 Arabidopsis thaliana
AT2G20230 10.0kb downstream 10.0kb downstream 12202 true Chr2: 8725541-8737742 Arabidopsis thaliana
AT2G20230 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8727743-8737742 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367945 5261 Brassicaceae View MSA
123837853 5264 Brassicales-Malvales View MSA
124337552 5266 SBM View MSA
124253906 5268 Malvidae View MSA
124063640 5270 Rosid View MSA
123743956 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.797     High  
cufflinks 43.484     High High
cufflinks 36.808     High  
cufflinks 36.574     High  
cufflinks 32.823     High Low
cufflinks 36.109     High  

0 Strain