Gene : AT2G19810 A. thaliana TAIR10
Defline:  (1 of 4) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  1220
Name:  ? AT2G19810 Secondary Identifier:  ? PAC:19639596
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G19810 0.5kb upstream 0.5kb upstream 2046 true Chr2: 8549813-8551858 Arabidopsis thaliana
AT2G19810 0.5kb upstream 0.5kb upstream 500 false Chr2: 8549813-8550312 Arabidopsis thaliana
AT2G19810 0.5kb downstream 0.5kb downstream 2046 true Chr2: 8550313-8552358 Arabidopsis thaliana
AT2G19810 0.5kb downstream 0.5kb downstream 500 false Chr2: 8551859-8552358 Arabidopsis thaliana
AT2G19810 1.0kb upstream 1.0kb upstream 2546 true Chr2: 8549313-8551858 Arabidopsis thaliana
AT2G19810 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8549313-8550312 Arabidopsis thaliana
AT2G19810 1.0kb downstream 1.0kb downstream 2546 true Chr2: 8550313-8552858 Arabidopsis thaliana
AT2G19810 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8551859-8552858 Arabidopsis thaliana
AT2G19810 2.0kb upstream 2.0kb upstream 3546 true Chr2: 8548313-8551858 Arabidopsis thaliana
AT2G19810 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8548313-8550312 Arabidopsis thaliana
AT2G19810 2.0kb downstream 2.0kb downstream 3546 true Chr2: 8550313-8553858 Arabidopsis thaliana
AT2G19810 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8551859-8553858 Arabidopsis thaliana
AT2G19810 5.0kb upstream 5.0kb upstream 6546 true Chr2: 8545313-8551858 Arabidopsis thaliana
AT2G19810 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8545313-8550312 Arabidopsis thaliana
AT2G19810 5.0kb downstream 5.0kb downstream 6546 true Chr2: 8550313-8556858 Arabidopsis thaliana
AT2G19810 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8551859-8556858 Arabidopsis thaliana
AT2G19810 10.0kb upstream 10.0kb upstream 11546 true Chr2: 8540313-8551858 Arabidopsis thaliana
AT2G19810 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8540313-8550312 Arabidopsis thaliana
AT2G19810 10.0kb downstream 10.0kb downstream 11546 true Chr2: 8550313-8561858 Arabidopsis thaliana
AT2G19810 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8551859-8561858 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369475 5261 Brassicaceae View MSA
123841324 5264 Brassicales-Malvales View MSA
124344801 5266 SBM View MSA
124248474 5268 Malvidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.377        
cufflinks 26.796        
cufflinks 40.378     High  
cufflinks 35.054     High  
cufflinks 60.226     High High
cufflinks 21.369       Low

0 Strain