Gene : AT2G18860 A. thaliana TAIR10
Defline:  (1 of 4) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  1122
Name:  ? AT2G18860 Secondary Identifier:  ? PAC:19640260
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18860 0.5kb upstream 0.5kb upstream 2234 true Chr2: 8163741-8165974 Arabidopsis thaliana
AT2G18860 0.5kb upstream 0.5kb upstream 500 false Chr2: 8163741-8164240 Arabidopsis thaliana
AT2G18860 0.5kb downstream 0.5kb downstream 2234 true Chr2: 8164241-8166474 Arabidopsis thaliana
AT2G18860 0.5kb downstream 0.5kb downstream 500 false Chr2: 8165975-8166474 Arabidopsis thaliana
AT2G18860 1.0kb upstream 1.0kb upstream 2734 true Chr2: 8163241-8165974 Arabidopsis thaliana
AT2G18860 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8163241-8164240 Arabidopsis thaliana
AT2G18860 1.0kb downstream 1.0kb downstream 2734 true Chr2: 8164241-8166974 Arabidopsis thaliana
AT2G18860 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8165975-8166974 Arabidopsis thaliana
AT2G18860 2.0kb upstream 2.0kb upstream 3734 true Chr2: 8162241-8165974 Arabidopsis thaliana
AT2G18860 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8162241-8164240 Arabidopsis thaliana
AT2G18860 2.0kb downstream 2.0kb downstream 3734 true Chr2: 8164241-8167974 Arabidopsis thaliana
AT2G18860 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8165975-8167974 Arabidopsis thaliana
AT2G18860 5.0kb upstream 5.0kb upstream 6734 true Chr2: 8159241-8165974 Arabidopsis thaliana
AT2G18860 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8159241-8164240 Arabidopsis thaliana
AT2G18860 5.0kb downstream 5.0kb downstream 6734 true Chr2: 8164241-8170974 Arabidopsis thaliana
AT2G18860 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8165975-8170974 Arabidopsis thaliana
AT2G18860 10.0kb upstream 10.0kb upstream 11734 true Chr2: 8154241-8165974 Arabidopsis thaliana
AT2G18860 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8154241-8164240 Arabidopsis thaliana
AT2G18860 10.0kb downstream 10.0kb downstream 11734 true Chr2: 8164241-8175974 Arabidopsis thaliana
AT2G18860 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8165975-8175974 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372484 5261 Brassicaceae View MSA
123840621 5264 Brassicales-Malvales View MSA
124346363 5266 SBM View MSA
124243646 5268 Malvidae View MSA
124050806 5270 Rosid View MSA
123751797 5271 Pentapetalae View MSA
122791749 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.339        
cufflinks 9.914        
cufflinks 4.924       Low
cufflinks 11.754       High
cufflinks 6.038        
cufflinks 9.129        

0 Strain