Gene : AT2G18193 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23070//PTHR23070:SF26 - BCS1 AAA-TYPE ATPASE // AAA-TYPE ATPASE LIKE PROTEIN Genomic Order:  1055
Name:  ? AT2G18193 Secondary Identifier:  ? PAC:19642968
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18193 0.5kb upstream 0.5kb upstream 2273 true Chr2: 7917505-7919777 Arabidopsis thaliana
AT2G18193 0.5kb upstream 0.5kb upstream 500 false Chr2: 7919278-7919777 Arabidopsis thaliana
AT2G18193 0.5kb downstream 0.5kb downstream 2273 true Chr2: 7917005-7919277 Arabidopsis thaliana
AT2G18193 0.5kb downstream 0.5kb downstream 500 false Chr2: 7917005-7917504 Arabidopsis thaliana
AT2G18193 1.0kb upstream 1.0kb upstream 2773 true Chr2: 7917505-7920277 Arabidopsis thaliana
AT2G18193 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7919278-7920277 Arabidopsis thaliana
AT2G18193 1.0kb downstream 1.0kb downstream 2773 true Chr2: 7916505-7919277 Arabidopsis thaliana
AT2G18193 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7916505-7917504 Arabidopsis thaliana
AT2G18193 2.0kb upstream 2.0kb upstream 3773 true Chr2: 7917505-7921277 Arabidopsis thaliana
AT2G18193 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7919278-7921277 Arabidopsis thaliana
AT2G18193 2.0kb downstream 2.0kb downstream 3773 true Chr2: 7915505-7919277 Arabidopsis thaliana
AT2G18193 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7915505-7917504 Arabidopsis thaliana
AT2G18193 5.0kb upstream 5.0kb upstream 6773 true Chr2: 7917505-7924277 Arabidopsis thaliana
AT2G18193 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7919278-7924277 Arabidopsis thaliana
AT2G18193 5.0kb downstream 5.0kb downstream 6773 true Chr2: 7912505-7919277 Arabidopsis thaliana
AT2G18193 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7912505-7917504 Arabidopsis thaliana
AT2G18193 10.0kb upstream 10.0kb upstream 11773 true Chr2: 7917505-7929277 Arabidopsis thaliana
AT2G18193 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7919278-7929277 Arabidopsis thaliana
AT2G18193 10.0kb downstream 10.0kb downstream 11773 true Chr2: 7907505-7919277 Arabidopsis thaliana
AT2G18193 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7907505-7917504 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368029 5261 Brassicaceae View MSA
123832854 5264 Brassicales-Malvales View MSA
124339168 5266 SBM View MSA
124240320 5268 Malvidae View MSA
124074026 5270 Rosid View MSA
123751190 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.478       Low
cufflinks 23.125        
cufflinks 27.206     High  
cufflinks 22.82        
cufflinks 15.829        
cufflinks 13.308        

0 Strain