Gene : AT2G18190 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23070//PTHR23070:SF26 - BCS1 AAA-TYPE ATPASE // AAA-TYPE ATPASE LIKE PROTEIN Genomic Order:  1054
Name:  ? AT2G18190 Secondary Identifier:  ? PAC:19639893
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18190 0.5kb upstream 0.5kb upstream 2068 true Chr2: 7914305-7916372 Arabidopsis thaliana
AT2G18190 0.5kb upstream 0.5kb upstream 500 false Chr2: 7915873-7916372 Arabidopsis thaliana
AT2G18190 0.5kb downstream 0.5kb downstream 2068 true Chr2: 7913805-7915872 Arabidopsis thaliana
AT2G18190 0.5kb downstream 0.5kb downstream 500 false Chr2: 7913805-7914304 Arabidopsis thaliana
AT2G18190 1.0kb upstream 1.0kb upstream 2568 true Chr2: 7914305-7916872 Arabidopsis thaliana
AT2G18190 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7915873-7916872 Arabidopsis thaliana
AT2G18190 1.0kb downstream 1.0kb downstream 2568 true Chr2: 7913305-7915872 Arabidopsis thaliana
AT2G18190 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7913305-7914304 Arabidopsis thaliana
AT2G18190 2.0kb upstream 2.0kb upstream 3568 true Chr2: 7914305-7917872 Arabidopsis thaliana
AT2G18190 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7915873-7917872 Arabidopsis thaliana
AT2G18190 2.0kb downstream 2.0kb downstream 3568 true Chr2: 7912305-7915872 Arabidopsis thaliana
AT2G18190 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7912305-7914304 Arabidopsis thaliana
AT2G18190 5.0kb upstream 5.0kb upstream 6568 true Chr2: 7914305-7920872 Arabidopsis thaliana
AT2G18190 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7915873-7920872 Arabidopsis thaliana
AT2G18190 5.0kb downstream 5.0kb downstream 6568 true Chr2: 7909305-7915872 Arabidopsis thaliana
AT2G18190 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7909305-7914304 Arabidopsis thaliana
AT2G18190 10.0kb upstream 10.0kb upstream 11568 true Chr2: 7914305-7925872 Arabidopsis thaliana
AT2G18190 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7915873-7925872 Arabidopsis thaliana
AT2G18190 10.0kb downstream 10.0kb downstream 11568 true Chr2: 7904305-7915872 Arabidopsis thaliana
AT2G18190 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7904305-7914304 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329276 5261 Brassicaceae Singleton cluster - no MSA
123770586 5264 Brassicales-Malvales Singleton cluster - no MSA
124269124 5266 SBM Singleton cluster - no MSA
124125284 5268 Malvidae Singleton cluster - no MSA
124074026 5270 Rosid View MSA
123751190 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.046     Low  
cufflinks 0.01     Low Low
cufflinks 0.866       High
cufflinks 0.088     Low  
cufflinks 0.351        
cufflinks 0.01     Low Low

0 Strain