Gene : CPK16 A. thaliana TAIR10
Primary Identifier:  ? AT2G17890 Defline:  (1 of 1) PF13202//PF13405//PF14531 - EF hand (EF-hand_5) // EF-hand domain (EF-hand_6) // Kinase-like (Kinase-like)
Genomic Order:  1022 Name:  ? AT2G17890
Secondary Identifier:  ? PAC:19642660
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17890 0.5kb upstream 0.5kb upstream 3243 true Chr2: 7769885-7773127 Arabidopsis thaliana
AT2G17890 0.5kb upstream 0.5kb upstream 500 false Chr2: 7772628-7773127 Arabidopsis thaliana
AT2G17890 0.5kb downstream 0.5kb downstream 3243 true Chr2: 7769385-7772627 Arabidopsis thaliana
AT2G17890 0.5kb downstream 0.5kb downstream 500 false Chr2: 7769385-7769884 Arabidopsis thaliana
AT2G17890 1.0kb upstream 1.0kb upstream 3743 true Chr2: 7769885-7773627 Arabidopsis thaliana
AT2G17890 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7772628-7773627 Arabidopsis thaliana
AT2G17890 1.0kb downstream 1.0kb downstream 3743 true Chr2: 7768885-7772627 Arabidopsis thaliana
AT2G17890 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7768885-7769884 Arabidopsis thaliana
AT2G17890 2.0kb upstream 2.0kb upstream 4743 true Chr2: 7769885-7774627 Arabidopsis thaliana
AT2G17890 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7772628-7774627 Arabidopsis thaliana
AT2G17890 2.0kb downstream 2.0kb downstream 4743 true Chr2: 7767885-7772627 Arabidopsis thaliana
AT2G17890 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7767885-7769884 Arabidopsis thaliana
AT2G17890 5.0kb upstream 5.0kb upstream 7743 true Chr2: 7769885-7777627 Arabidopsis thaliana
AT2G17890 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7772628-7777627 Arabidopsis thaliana
AT2G17890 5.0kb downstream 5.0kb downstream 7743 true Chr2: 7764885-7772627 Arabidopsis thaliana
AT2G17890 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7764885-7769884 Arabidopsis thaliana
AT2G17890 10.0kb upstream 10.0kb upstream 12743 true Chr2: 7769885-7782627 Arabidopsis thaliana
AT2G17890 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7772628-7782627 Arabidopsis thaliana
AT2G17890 10.0kb downstream 10.0kb downstream 12743 true Chr2: 7759885-7772627 Arabidopsis thaliana
AT2G17890 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7759885-7769884 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374968 5261 Brassicaceae View MSA
123836400 5264 Brassicales-Malvales View MSA
124348770 5266 SBM View MSA
124243532 5268 Malvidae View MSA
124063775 5270 Rosid View MSA
123736489 5271 Pentapetalae View MSA
122791414 5272 Eudicot View MSA
122046992 5273 Angiosperm View MSA
121348543 5274 Embryophyte View MSA
123380907 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.077     Low  
cufflinks 0.005     Low Low
cufflinks 0.11     Low  
cufflinks 0.006     Low Low
cufflinks 0.257     Low High

0 Strain