Gene : OXA1L A. thaliana TAIR10
Primary Identifier:  ? AT2G46470 Defline:  (1 of 2) PTHR12428//PTHR12428:SF23 - OXA1 // SUBFAMILY NOT NAMED
Genomic Order:  4067 Name:  ? AT2G46470
Secondary Identifier:  ? PAC:19640195
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46470 0.5kb upstream 0.5kb upstream 3311 true Chr2: 19071813-19075123 Arabidopsis thaliana
AT2G46470 0.5kb upstream 0.5kb upstream 500 false Chr2: 19071813-19072312 Arabidopsis thaliana
AT2G46470 0.5kb downstream 0.5kb downstream 3311 true Chr2: 19072313-19075623 Arabidopsis thaliana
AT2G46470 0.5kb downstream 0.5kb downstream 500 false Chr2: 19075124-19075623 Arabidopsis thaliana
AT2G46470 1.0kb upstream 1.0kb upstream 3811 true Chr2: 19071313-19075123 Arabidopsis thaliana
AT2G46470 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19071313-19072312 Arabidopsis thaliana
AT2G46470 1.0kb downstream 1.0kb downstream 3811 true Chr2: 19072313-19076123 Arabidopsis thaliana
AT2G46470 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19075124-19076123 Arabidopsis thaliana
AT2G46470 2.0kb upstream 2.0kb upstream 4811 true Chr2: 19070313-19075123 Arabidopsis thaliana
AT2G46470 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19070313-19072312 Arabidopsis thaliana
AT2G46470 2.0kb downstream 2.0kb downstream 4811 true Chr2: 19072313-19077123 Arabidopsis thaliana
AT2G46470 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19075124-19077123 Arabidopsis thaliana
AT2G46470 5.0kb upstream 5.0kb upstream 7811 true Chr2: 19067313-19075123 Arabidopsis thaliana
AT2G46470 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19067313-19072312 Arabidopsis thaliana
AT2G46470 5.0kb downstream 5.0kb downstream 7811 true Chr2: 19072313-19080123 Arabidopsis thaliana
AT2G46470 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19075124-19080123 Arabidopsis thaliana
AT2G46470 10.0kb upstream 10.0kb upstream 12811 true Chr2: 19062313-19075123 Arabidopsis thaliana
AT2G46470 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19062313-19072312 Arabidopsis thaliana
AT2G46470 10.0kb downstream 10.0kb downstream 12811 true Chr2: 19072313-19085123 Arabidopsis thaliana
AT2G46470 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19075124-19085123 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377585 5261 Brassicaceae View MSA
123801573 5264 Brassicales-Malvales View MSA
124298859 5266 SBM View MSA
124150406 5268 Malvidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.799        
cufflinks 13.184        
cufflinks 8.218        
cufflinks 13.332       High
cufflinks 7.737       Low
cufflinks 12.166        

0 Strain