Gene : AT2G46150 A. thaliana TAIR10

Defline:  (1 of 1) PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  4032
Name:  ? AT2G46150 Secondary Identifier:  ? PAC:19641537

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46150 0.5kb upstream 0.5kb upstream 1474 true Chr2: 18960903-18962376 Arabidopsis thaliana
AT2G46150 0.5kb upstream 0.5kb upstream 500 false Chr2: 18960903-18961402 Arabidopsis thaliana
AT2G46150 0.5kb downstream 0.5kb downstream 1474 true Chr2: 18961403-18962876 Arabidopsis thaliana
AT2G46150 0.5kb downstream 0.5kb downstream 500 false Chr2: 18962377-18962876 Arabidopsis thaliana
AT2G46150 1.0kb upstream 1.0kb upstream 1974 true Chr2: 18960403-18962376 Arabidopsis thaliana
AT2G46150 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18960403-18961402 Arabidopsis thaliana
AT2G46150 1.0kb downstream 1.0kb downstream 1974 true Chr2: 18961403-18963376 Arabidopsis thaliana
AT2G46150 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18962377-18963376 Arabidopsis thaliana
AT2G46150 2.0kb upstream 2.0kb upstream 2974 true Chr2: 18959403-18962376 Arabidopsis thaliana
AT2G46150 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18959403-18961402 Arabidopsis thaliana
AT2G46150 2.0kb downstream 2.0kb downstream 2974 true Chr2: 18961403-18964376 Arabidopsis thaliana
AT2G46150 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18962377-18964376 Arabidopsis thaliana
AT2G46150 5.0kb upstream 5.0kb upstream 5974 true Chr2: 18956403-18962376 Arabidopsis thaliana
AT2G46150 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18956403-18961402 Arabidopsis thaliana
AT2G46150 5.0kb downstream 5.0kb downstream 5974 true Chr2: 18961403-18967376 Arabidopsis thaliana
AT2G46150 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18962377-18967376 Arabidopsis thaliana
AT2G46150 10.0kb upstream 10.0kb upstream 10974 true Chr2: 18951403-18962376 Arabidopsis thaliana
AT2G46150 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18951403-18961402 Arabidopsis thaliana
AT2G46150 10.0kb downstream 10.0kb downstream 10974 true Chr2: 18961403-18972376 Arabidopsis thaliana
AT2G46150 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18962377-18972376 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368563 5261 Brassicaceae View MSA
123834880 5264 Brassicales-Malvales View MSA
124348592 5266 SBM View MSA
124246491 5268 Malvidae View MSA
124074203 5270 Rosid View MSA
123748410 5271 Pentapetalae View MSA
122786143 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.877        
cufflinks 4.01        
cufflinks 0.705       Low
cufflinks 7.63       High
cufflinks 0.988       Low
cufflinks 6.147        

0 Strain