Gene : CRR4 A. thaliana TAIR10
Primary Identifier:  ? AT2G45350 Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)
Genomic Order:  3952 Name:  ? AT2G45350
Secondary Identifier:  ? PAC:19639303
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45350 0.5kb upstream 0.5kb upstream 2342 true Chr2: 18694816-18697157 Arabidopsis thaliana
AT2G45350 0.5kb upstream 0.5kb upstream 500 false Chr2: 18696658-18697157 Arabidopsis thaliana
AT2G45350 0.5kb downstream 0.5kb downstream 2342 true Chr2: 18694316-18696657 Arabidopsis thaliana
AT2G45350 0.5kb downstream 0.5kb downstream 500 false Chr2: 18694316-18694815 Arabidopsis thaliana
AT2G45350 1.0kb upstream 1.0kb upstream 2842 true Chr2: 18694816-18697657 Arabidopsis thaliana
AT2G45350 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18696658-18697657 Arabidopsis thaliana
AT2G45350 1.0kb downstream 1.0kb downstream 2842 true Chr2: 18693816-18696657 Arabidopsis thaliana
AT2G45350 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18693816-18694815 Arabidopsis thaliana
AT2G45350 2.0kb upstream 2.0kb upstream 3842 true Chr2: 18694816-18698657 Arabidopsis thaliana
AT2G45350 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18696658-18698657 Arabidopsis thaliana
AT2G45350 2.0kb downstream 2.0kb downstream 3842 true Chr2: 18692816-18696657 Arabidopsis thaliana
AT2G45350 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18692816-18694815 Arabidopsis thaliana
AT2G45350 5.0kb upstream 5.0kb upstream 6842 true Chr2: 18694816-18701657 Arabidopsis thaliana
AT2G45350 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18696658-18701657 Arabidopsis thaliana
AT2G45350 5.0kb downstream 5.0kb downstream 6842 true Chr2: 18689816-18696657 Arabidopsis thaliana
AT2G45350 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18689816-18694815 Arabidopsis thaliana
AT2G45350 10.0kb upstream 10.0kb upstream 11842 true Chr2: 18694816-18706657 Arabidopsis thaliana
AT2G45350 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18696658-18706657 Arabidopsis thaliana
AT2G45350 10.0kb downstream 10.0kb downstream 11842 true Chr2: 18684816-18696657 Arabidopsis thaliana
AT2G45350 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18684816-18694815 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369368 5261 Brassicaceae View MSA
123833051 5264 Brassicales-Malvales View MSA
124340860 5266 SBM View MSA
124238611 5268 Malvidae View MSA
124068816 5270 Rosid View MSA
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.262       High
cufflinks 0.074     Low Low
cufflinks 1.013        
cufflinks 0.156     Low  
cufflinks 0.836        
cufflinks 0.093     Low  

0 Strain