Gene : AT2G45500 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23074//PTHR23074:SF86 - AAA ATPASE // SPASTIN Genomic Order:  3969
Name:  ? AT2G45500 Secondary Identifier:  ? PAC:19640577
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45500 0.5kb upstream 0.5kb upstream 3554 true Chr2: 18749798-18753351 Arabidopsis thaliana
AT2G45500 0.5kb upstream 0.5kb upstream 500 false Chr2: 18752852-18753351 Arabidopsis thaliana
AT2G45500 0.5kb downstream 0.5kb downstream 3554 true Chr2: 18749298-18752851 Arabidopsis thaliana
AT2G45500 0.5kb downstream 0.5kb downstream 500 false Chr2: 18749298-18749797 Arabidopsis thaliana
AT2G45500 1.0kb upstream 1.0kb upstream 4054 true Chr2: 18749798-18753851 Arabidopsis thaliana
AT2G45500 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18752852-18753851 Arabidopsis thaliana
AT2G45500 1.0kb downstream 1.0kb downstream 4054 true Chr2: 18748798-18752851 Arabidopsis thaliana
AT2G45500 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18748798-18749797 Arabidopsis thaliana
AT2G45500 2.0kb upstream 2.0kb upstream 5054 true Chr2: 18749798-18754851 Arabidopsis thaliana
AT2G45500 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18752852-18754851 Arabidopsis thaliana
AT2G45500 2.0kb downstream 2.0kb downstream 5054 true Chr2: 18747798-18752851 Arabidopsis thaliana
AT2G45500 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18747798-18749797 Arabidopsis thaliana
AT2G45500 5.0kb upstream 5.0kb upstream 8054 true Chr2: 18749798-18757851 Arabidopsis thaliana
AT2G45500 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18752852-18757851 Arabidopsis thaliana
AT2G45500 5.0kb downstream 5.0kb downstream 8054 true Chr2: 18744798-18752851 Arabidopsis thaliana
AT2G45500 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18744798-18749797 Arabidopsis thaliana
AT2G45500 10.0kb upstream 10.0kb upstream 13054 true Chr2: 18749798-18762851 Arabidopsis thaliana
AT2G45500 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18752852-18762851 Arabidopsis thaliana
AT2G45500 10.0kb downstream 10.0kb downstream 13054 true Chr2: 18739798-18752851 Arabidopsis thaliana
AT2G45500 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18739798-18749797 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362220 5261 Brassicaceae View MSA
123831003 5264 Brassicales-Malvales View MSA
124338043 5266 SBM View MSA
124250579 5268 Malvidae View MSA
124063142 5270 Rosid View MSA
123736430 5271 Pentapetalae View MSA
122793847 5272 Eudicot View MSA
122042209 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344282 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.815       High
cufflinks 2.964        
cufflinks 2.528       Low
cufflinks 2.976        
cufflinks 3.306        
cufflinks 2.674        

0 Strain