Gene : AT2G45210 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31374//PTHR31374:SF56 - FAMILY NOT NAMED // AUXIN-REGULATED PROTEIN-RELATED Genomic Order:  3939
Name:  ? AT2G45210 Secondary Identifier:  ? PAC:19643406
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45210 0.5kb upstream 0.5kb upstream 1639 true Chr2: 18641066-18642704 Arabidopsis thaliana
AT2G45210 0.5kb upstream 0.5kb upstream 500 false Chr2: 18641066-18641565 Arabidopsis thaliana
AT2G45210 0.5kb downstream 0.5kb downstream 1639 true Chr2: 18641566-18643204 Arabidopsis thaliana
AT2G45210 0.5kb downstream 0.5kb downstream 500 false Chr2: 18642705-18643204 Arabidopsis thaliana
AT2G45210 1.0kb upstream 1.0kb upstream 2139 true Chr2: 18640566-18642704 Arabidopsis thaliana
AT2G45210 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18640566-18641565 Arabidopsis thaliana
AT2G45210 1.0kb downstream 1.0kb downstream 2139 true Chr2: 18641566-18643704 Arabidopsis thaliana
AT2G45210 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18642705-18643704 Arabidopsis thaliana
AT2G45210 2.0kb upstream 2.0kb upstream 3139 true Chr2: 18639566-18642704 Arabidopsis thaliana
AT2G45210 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18639566-18641565 Arabidopsis thaliana
AT2G45210 2.0kb downstream 2.0kb downstream 3139 true Chr2: 18641566-18644704 Arabidopsis thaliana
AT2G45210 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18642705-18644704 Arabidopsis thaliana
AT2G45210 5.0kb upstream 5.0kb upstream 6139 true Chr2: 18636566-18642704 Arabidopsis thaliana
AT2G45210 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18636566-18641565 Arabidopsis thaliana
AT2G45210 5.0kb downstream 5.0kb downstream 6139 true Chr2: 18641566-18647704 Arabidopsis thaliana
AT2G45210 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18642705-18647704 Arabidopsis thaliana
AT2G45210 10.0kb upstream 10.0kb upstream 11139 true Chr2: 18631566-18642704 Arabidopsis thaliana
AT2G45210 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18631566-18641565 Arabidopsis thaliana
AT2G45210 10.0kb downstream 10.0kb downstream 11139 true Chr2: 18641566-18652704 Arabidopsis thaliana
AT2G45210 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18642705-18652704 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362945 5261 Brassicaceae View MSA
123798455 5264 Brassicales-Malvales View MSA
124296088 5266 SBM View MSA
124254272 5268 Malvidae View MSA
124066518 5270 Rosid View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.321       Low
cufflinks 21.104        
cufflinks 2.449       Low
cufflinks 15.661        
cufflinks 5.294        
cufflinks 19.687        

0 Strain