Gene : MAP1A A. thaliana TAIR10
Primary Identifier:  ? AT2G45240 Defline:  (1 of 1) PTHR10804:SF13 - METHIONINE AMINOPEPTIDASE 1
Genomic Order:  3941 Name:  ? AT2G45240
Secondary Identifier:  ? PAC:19638108
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45240 0.5kb upstream 0.5kb upstream 3639 true Chr2: 18655439-18659077 Arabidopsis thaliana
AT2G45240 0.5kb upstream 0.5kb upstream 500 false Chr2: 18655439-18655938 Arabidopsis thaliana
AT2G45240 0.5kb downstream 0.5kb downstream 3639 true Chr2: 18655939-18659577 Arabidopsis thaliana
AT2G45240 0.5kb downstream 0.5kb downstream 500 false Chr2: 18659078-18659577 Arabidopsis thaliana
AT2G45240 1.0kb upstream 1.0kb upstream 4139 true Chr2: 18654939-18659077 Arabidopsis thaliana
AT2G45240 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18654939-18655938 Arabidopsis thaliana
AT2G45240 1.0kb downstream 1.0kb downstream 4139 true Chr2: 18655939-18660077 Arabidopsis thaliana
AT2G45240 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18659078-18660077 Arabidopsis thaliana
AT2G45240 2.0kb upstream 2.0kb upstream 5139 true Chr2: 18653939-18659077 Arabidopsis thaliana
AT2G45240 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18653939-18655938 Arabidopsis thaliana
AT2G45240 2.0kb downstream 2.0kb downstream 5139 true Chr2: 18655939-18661077 Arabidopsis thaliana
AT2G45240 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18659078-18661077 Arabidopsis thaliana
AT2G45240 5.0kb upstream 5.0kb upstream 8139 true Chr2: 18650939-18659077 Arabidopsis thaliana
AT2G45240 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18650939-18655938 Arabidopsis thaliana
AT2G45240 5.0kb downstream 5.0kb downstream 8139 true Chr2: 18655939-18664077 Arabidopsis thaliana
AT2G45240 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18659078-18664077 Arabidopsis thaliana
AT2G45240 10.0kb upstream 10.0kb upstream 13139 true Chr2: 18645939-18659077 Arabidopsis thaliana
AT2G45240 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18645939-18655938 Arabidopsis thaliana
AT2G45240 10.0kb downstream 10.0kb downstream 13139 true Chr2: 18655939-18669077 Arabidopsis thaliana
AT2G45240 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18659078-18669077 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026230 5273 Angiosperm View MSA
122371597 5261 Brassicaceae View MSA
123833138 5264 Brassicales-Malvales View MSA
124340836 5266 SBM View MSA
124239739 5268 Malvidae View MSA
124062332 5270 Rosid View MSA
123740512 5271 Pentapetalae View MSA
122787806 5272 Eudicot View MSA
123429177 5275 Viridiplantae View MSA
121350168 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.019        
cufflinks 10.986        
cufflinks 7.497       Low
cufflinks 12.295        
cufflinks 7.833       Low
cufflinks 12.625        

0 Strain