Gene : AT2G44580 A. thaliana TAIR10
Defline:  (1 of 1) K11271 - sister chromatid cohesion protein DCC1 (DSCC1, DCC1) Genomic Order:  3875
Name:  ? AT2G44580 Secondary Identifier:  ? PAC:19640407
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44580 0.5kb upstream 0.5kb upstream 2039 true Chr2: 18401878-18403916 Arabidopsis thaliana
AT2G44580 0.5kb upstream 0.5kb upstream 500 false Chr2: 18403417-18403916 Arabidopsis thaliana
AT2G44580 0.5kb downstream 0.5kb downstream 2039 true Chr2: 18401378-18403416 Arabidopsis thaliana
AT2G44580 0.5kb downstream 0.5kb downstream 500 false Chr2: 18401378-18401877 Arabidopsis thaliana
AT2G44580 1.0kb upstream 1.0kb upstream 2539 true Chr2: 18401878-18404416 Arabidopsis thaliana
AT2G44580 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18403417-18404416 Arabidopsis thaliana
AT2G44580 1.0kb downstream 1.0kb downstream 2539 true Chr2: 18400878-18403416 Arabidopsis thaliana
AT2G44580 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18400878-18401877 Arabidopsis thaliana
AT2G44580 2.0kb upstream 2.0kb upstream 3539 true Chr2: 18401878-18405416 Arabidopsis thaliana
AT2G44580 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18403417-18405416 Arabidopsis thaliana
AT2G44580 2.0kb downstream 2.0kb downstream 3539 true Chr2: 18399878-18403416 Arabidopsis thaliana
AT2G44580 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18399878-18401877 Arabidopsis thaliana
AT2G44580 5.0kb upstream 5.0kb upstream 6539 true Chr2: 18401878-18408416 Arabidopsis thaliana
AT2G44580 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18403417-18408416 Arabidopsis thaliana
AT2G44580 5.0kb downstream 5.0kb downstream 6539 true Chr2: 18396878-18403416 Arabidopsis thaliana
AT2G44580 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18396878-18401877 Arabidopsis thaliana
AT2G44580 10.0kb upstream 10.0kb upstream 11539 true Chr2: 18401878-18413416 Arabidopsis thaliana
AT2G44580 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18403417-18413416 Arabidopsis thaliana
AT2G44580 10.0kb downstream 10.0kb downstream 11539 true Chr2: 18391878-18403416 Arabidopsis thaliana
AT2G44580 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18391878-18401877 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365592 5261 Brassicaceae View MSA
123830562 5264 Brassicales-Malvales View MSA
124337546 5266 SBM View MSA
124241698 5268 Malvidae View MSA
124066083 5270 Rosid View MSA
123738990 5271 Pentapetalae View MSA
122785967 5272 Eudicot View MSA
122045586 5273 Angiosperm View MSA
121346207 5274 Embryophyte View MSA
123425480 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.207        
cufflinks 4.071        
cufflinks 2.63        
cufflinks 3.18        
cufflinks 1.881       Low
cufflinks 4.083        

0 Strain