Gene : AT2G44530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10210//PTHR10210:SF58 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 5, CHLOROPLASTIC Genomic Order:  3868
Name:  ? AT2G44530 Secondary Identifier:  ? PAC:19640957
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-662 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44530 0.5kb upstream 0.5kb upstream 3129 true Chr2: 18383015-18386143 Arabidopsis thaliana
AT2G44530 0.5kb upstream 0.5kb upstream 500 false Chr2: 18383015-18383514 Arabidopsis thaliana
AT2G44530 0.5kb downstream 0.5kb downstream 3129 true Chr2: 18383515-18386643 Arabidopsis thaliana
AT2G44530 0.5kb downstream 0.5kb downstream 500 false Chr2: 18386144-18386643 Arabidopsis thaliana
AT2G44530 1.0kb upstream 1.0kb upstream 3629 true Chr2: 18382515-18386143 Arabidopsis thaliana
AT2G44530 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18382515-18383514 Arabidopsis thaliana
AT2G44530 1.0kb downstream 1.0kb downstream 3629 true Chr2: 18383515-18387143 Arabidopsis thaliana
AT2G44530 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18386144-18387143 Arabidopsis thaliana
AT2G44530 2.0kb upstream 2.0kb upstream 4629 true Chr2: 18381515-18386143 Arabidopsis thaliana
AT2G44530 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18381515-18383514 Arabidopsis thaliana
AT2G44530 2.0kb downstream 2.0kb downstream 4629 true Chr2: 18383515-18388143 Arabidopsis thaliana
AT2G44530 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18386144-18388143 Arabidopsis thaliana
AT2G44530 5.0kb upstream 5.0kb upstream 7629 true Chr2: 18378515-18386143 Arabidopsis thaliana
AT2G44530 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18378515-18383514 Arabidopsis thaliana
AT2G44530 5.0kb downstream 5.0kb downstream 7629 true Chr2: 18383515-18391143 Arabidopsis thaliana
AT2G44530 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18386144-18391143 Arabidopsis thaliana
AT2G44530 10.0kb upstream 10.0kb upstream 12629 true Chr2: 18373515-18386143 Arabidopsis thaliana
AT2G44530 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18373515-18383514 Arabidopsis thaliana
AT2G44530 10.0kb downstream 10.0kb downstream 12629 true Chr2: 18383515-18396143 Arabidopsis thaliana
AT2G44530 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18386144-18396143 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361116 5261 Brassicaceae View MSA
123829238 5264 Brassicales-Malvales View MSA
124341490 5266 SBM View MSA
124240392 5268 Malvidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.564       High
cufflinks 7.271       Low
cufflinks 8.59        
cufflinks 7.616        
cufflinks 8.967        
cufflinks 8.33        

0 Strain