Gene : EDE1 A. thaliana TAIR10
Primary Identifier:  ? AT2G44190 Defline:  (1 of 2) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED
Genomic Order:  3831 Name:  ? AT2G44190
Secondary Identifier:  ? PAC:19642031
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44190 0.5kb upstream 0.5kb upstream 2807 true Chr2: 18271691-18274497 Arabidopsis thaliana
AT2G44190 0.5kb upstream 0.5kb upstream 500 false Chr2: 18271691-18272190 Arabidopsis thaliana
AT2G44190 0.5kb downstream 0.5kb downstream 2807 true Chr2: 18272191-18274997 Arabidopsis thaliana
AT2G44190 0.5kb downstream 0.5kb downstream 500 false Chr2: 18274498-18274997 Arabidopsis thaliana
AT2G44190 1.0kb upstream 1.0kb upstream 3307 true Chr2: 18271191-18274497 Arabidopsis thaliana
AT2G44190 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18271191-18272190 Arabidopsis thaliana
AT2G44190 1.0kb downstream 1.0kb downstream 3307 true Chr2: 18272191-18275497 Arabidopsis thaliana
AT2G44190 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18274498-18275497 Arabidopsis thaliana
AT2G44190 2.0kb upstream 2.0kb upstream 4307 true Chr2: 18270191-18274497 Arabidopsis thaliana
AT2G44190 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18270191-18272190 Arabidopsis thaliana
AT2G44190 2.0kb downstream 2.0kb downstream 4307 true Chr2: 18272191-18276497 Arabidopsis thaliana
AT2G44190 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18274498-18276497 Arabidopsis thaliana
AT2G44190 5.0kb upstream 5.0kb upstream 7307 true Chr2: 18267191-18274497 Arabidopsis thaliana
AT2G44190 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18267191-18272190 Arabidopsis thaliana
AT2G44190 5.0kb downstream 5.0kb downstream 7307 true Chr2: 18272191-18279497 Arabidopsis thaliana
AT2G44190 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18274498-18279497 Arabidopsis thaliana
AT2G44190 10.0kb upstream 10.0kb upstream 12307 true Chr2: 18262191-18274497 Arabidopsis thaliana
AT2G44190 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18262191-18272190 Arabidopsis thaliana
AT2G44190 10.0kb downstream 10.0kb downstream 12307 true Chr2: 18272191-18284497 Arabidopsis thaliana
AT2G44190 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18274498-18284497 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363426 5261 Brassicaceae View MSA
123828950 5264 Brassicales-Malvales View MSA
124346593 5266 SBM View MSA
124248083 5268 Malvidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.929        
cufflinks 2.385        
cufflinks 0.471        
cufflinks 1.886        
cufflinks 0.318       Low
cufflinks 3.766       High

0 Strain