Gene : SSI2 A. thaliana TAIR10
Primary Identifier:  ? AT2G43710 Defline:  (1 of 1) PTHR31155//PTHR31155:SF9 - ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED // ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 7, CHLOROPLASTIC
Genomic Order:  3778 Name:  ? AT2G43710
Secondary Identifier:  ? PAC:19642377
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5147 Arabidopsis thaliana pathologic  
Athaliana PWY-5156 Arabidopsis thaliana pathologic  
Athaliana PWY-5366 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43710 0.5kb upstream 0.5kb upstream 3434 true Chr2: 18119456-18122889 Arabidopsis thaliana
AT2G43710 0.5kb upstream 0.5kb upstream 500 false Chr2: 18119456-18119955 Arabidopsis thaliana
AT2G43710 0.5kb downstream 0.5kb downstream 3434 true Chr2: 18119956-18123389 Arabidopsis thaliana
AT2G43710 0.5kb downstream 0.5kb downstream 500 false Chr2: 18122890-18123389 Arabidopsis thaliana
AT2G43710 1.0kb upstream 1.0kb upstream 3934 true Chr2: 18118956-18122889 Arabidopsis thaliana
AT2G43710 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18118956-18119955 Arabidopsis thaliana
AT2G43710 1.0kb downstream 1.0kb downstream 3934 true Chr2: 18119956-18123889 Arabidopsis thaliana
AT2G43710 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18122890-18123889 Arabidopsis thaliana
AT2G43710 2.0kb upstream 2.0kb upstream 4934 true Chr2: 18117956-18122889 Arabidopsis thaliana
AT2G43710 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18117956-18119955 Arabidopsis thaliana
AT2G43710 2.0kb downstream 2.0kb downstream 4934 true Chr2: 18119956-18124889 Arabidopsis thaliana
AT2G43710 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18122890-18124889 Arabidopsis thaliana
AT2G43710 5.0kb upstream 5.0kb upstream 7934 true Chr2: 18114956-18122889 Arabidopsis thaliana
AT2G43710 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18114956-18119955 Arabidopsis thaliana
AT2G43710 5.0kb downstream 5.0kb downstream 7934 true Chr2: 18119956-18127889 Arabidopsis thaliana
AT2G43710 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18122890-18127889 Arabidopsis thaliana
AT2G43710 10.0kb upstream 10.0kb upstream 12934 true Chr2: 18109956-18122889 Arabidopsis thaliana
AT2G43710 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18109956-18119955 Arabidopsis thaliana
AT2G43710 10.0kb downstream 10.0kb downstream 12934 true Chr2: 18119956-18132889 Arabidopsis thaliana
AT2G43710 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18122890-18132889 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373650 5261 Brassicaceae View MSA
123840023 5264 Brassicales-Malvales View MSA
124345427 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.728        
cufflinks 9.884       Low
cufflinks 23.954       High
cufflinks 11.012        
cufflinks 20.519        
cufflinks 12.274        

0 Strain