Gene : AT2G43370 A. thaliana TAIR10
Defline:  (1 of 1) K13155 - U11/U12 small nuclear ribonucleoprotein 35 kDa protein (SNRNP35) Genomic Order:  3740
Name:  ? AT2G43370 Secondary Identifier:  ? PAC:19639497
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43370 0.5kb upstream 0.5kb upstream 2585 true Chr2: 18012870-18015454 Arabidopsis thaliana
AT2G43370 0.5kb upstream 0.5kb upstream 500 false Chr2: 18012870-18013369 Arabidopsis thaliana
AT2G43370 0.5kb downstream 0.5kb downstream 2585 true Chr2: 18013370-18015954 Arabidopsis thaliana
AT2G43370 0.5kb downstream 0.5kb downstream 500 false Chr2: 18015455-18015954 Arabidopsis thaliana
AT2G43370 1.0kb upstream 1.0kb upstream 3085 true Chr2: 18012370-18015454 Arabidopsis thaliana
AT2G43370 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18012370-18013369 Arabidopsis thaliana
AT2G43370 1.0kb downstream 1.0kb downstream 3085 true Chr2: 18013370-18016454 Arabidopsis thaliana
AT2G43370 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18015455-18016454 Arabidopsis thaliana
AT2G43370 2.0kb upstream 2.0kb upstream 4085 true Chr2: 18011370-18015454 Arabidopsis thaliana
AT2G43370 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18011370-18013369 Arabidopsis thaliana
AT2G43370 2.0kb downstream 2.0kb downstream 4085 true Chr2: 18013370-18017454 Arabidopsis thaliana
AT2G43370 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18015455-18017454 Arabidopsis thaliana
AT2G43370 5.0kb upstream 5.0kb upstream 7085 true Chr2: 18008370-18015454 Arabidopsis thaliana
AT2G43370 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18008370-18013369 Arabidopsis thaliana
AT2G43370 5.0kb downstream 5.0kb downstream 7085 true Chr2: 18013370-18020454 Arabidopsis thaliana
AT2G43370 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18015455-18020454 Arabidopsis thaliana
AT2G43370 10.0kb upstream 10.0kb upstream 12085 true Chr2: 18003370-18015454 Arabidopsis thaliana
AT2G43370 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18003370-18013369 Arabidopsis thaliana
AT2G43370 10.0kb downstream 10.0kb downstream 12085 true Chr2: 18013370-18025454 Arabidopsis thaliana
AT2G43370 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18015455-18025454 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369028 5261 Brassicaceae View MSA
123833161 5264 Brassicales-Malvales View MSA
124339746 5266 SBM View MSA
124240814 5268 Malvidae View MSA
124062373 5270 Rosid View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.234       Low
cufflinks 5.599        
cufflinks 4.338        
cufflinks 6.466       High
cufflinks 4.489        
cufflinks 5.39        

0 Strain