Gene : AT2G43210 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13020//PTHR13020:SF36 - UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING // EXPRESSED PROTEIN Genomic Order:  3722
Name:  ? AT2G43210 Secondary Identifier:  ? PAC:19638666
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43210 0.5kb upstream 0.5kb upstream 3528 true Chr2: 17960200-17963727 Arabidopsis thaliana
AT2G43210 0.5kb upstream 0.5kb upstream 500 false Chr2: 17960200-17960699 Arabidopsis thaliana
AT2G43210 0.5kb downstream 0.5kb downstream 3528 true Chr2: 17960700-17964227 Arabidopsis thaliana
AT2G43210 0.5kb downstream 0.5kb downstream 500 false Chr2: 17963728-17964227 Arabidopsis thaliana
AT2G43210 1.0kb upstream 1.0kb upstream 4028 true Chr2: 17959700-17963727 Arabidopsis thaliana
AT2G43210 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17959700-17960699 Arabidopsis thaliana
AT2G43210 1.0kb downstream 1.0kb downstream 4028 true Chr2: 17960700-17964727 Arabidopsis thaliana
AT2G43210 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17963728-17964727 Arabidopsis thaliana
AT2G43210 2.0kb upstream 2.0kb upstream 5028 true Chr2: 17958700-17963727 Arabidopsis thaliana
AT2G43210 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17958700-17960699 Arabidopsis thaliana
AT2G43210 2.0kb downstream 2.0kb downstream 5028 true Chr2: 17960700-17965727 Arabidopsis thaliana
AT2G43210 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17963728-17965727 Arabidopsis thaliana
AT2G43210 5.0kb upstream 5.0kb upstream 8028 true Chr2: 17955700-17963727 Arabidopsis thaliana
AT2G43210 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17955700-17960699 Arabidopsis thaliana
AT2G43210 5.0kb downstream 5.0kb downstream 8028 true Chr2: 17960700-17968727 Arabidopsis thaliana
AT2G43210 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17963728-17968727 Arabidopsis thaliana
AT2G43210 10.0kb upstream 10.0kb upstream 13028 true Chr2: 17950700-17963727 Arabidopsis thaliana
AT2G43210 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17950700-17960699 Arabidopsis thaliana
AT2G43210 10.0kb downstream 10.0kb downstream 13028 true Chr2: 17960700-17973727 Arabidopsis thaliana
AT2G43210 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17963728-17973727 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360901 5261 Brassicaceae View MSA
123833510 5264 Brassicales-Malvales View MSA
124340632 5266 SBM View MSA
124237812 5268 Malvidae View MSA
124068020 5270 Rosid View MSA
123746663 5271 Pentapetalae View MSA
122772002 5272 Eudicot View MSA
122046799 5273 Angiosperm View MSA
121344006 5274 Embryophyte View MSA
123425372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.908        
cufflinks 8.205       High
cufflinks 5.499       Low
cufflinks 8.689       High
cufflinks 5.907        
cufflinks 7.059        

0 Strain