Gene : AT2G42950 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21535//PTHR21535:SF50 - MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8 // SUBFAMILY NOT NAMED Genomic Order:  3695
Name:  ? AT2G42950 Secondary Identifier:  ? PAC:19638652
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42950 0.5kb upstream 0.5kb upstream 3169 true Chr2: 17863319-17866487 Arabidopsis thaliana
AT2G42950 0.5kb upstream 0.5kb upstream 500 false Chr2: 17863319-17863818 Arabidopsis thaliana
AT2G42950 0.5kb downstream 0.5kb downstream 3169 true Chr2: 17863819-17866987 Arabidopsis thaliana
AT2G42950 0.5kb downstream 0.5kb downstream 500 false Chr2: 17866488-17866987 Arabidopsis thaliana
AT2G42950 1.0kb upstream 1.0kb upstream 3669 true Chr2: 17862819-17866487 Arabidopsis thaliana
AT2G42950 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17862819-17863818 Arabidopsis thaliana
AT2G42950 1.0kb downstream 1.0kb downstream 3669 true Chr2: 17863819-17867487 Arabidopsis thaliana
AT2G42950 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17866488-17867487 Arabidopsis thaliana
AT2G42950 2.0kb upstream 2.0kb upstream 4669 true Chr2: 17861819-17866487 Arabidopsis thaliana
AT2G42950 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17861819-17863818 Arabidopsis thaliana
AT2G42950 2.0kb downstream 2.0kb downstream 4669 true Chr2: 17863819-17868487 Arabidopsis thaliana
AT2G42950 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17866488-17868487 Arabidopsis thaliana
AT2G42950 5.0kb upstream 5.0kb upstream 7669 true Chr2: 17858819-17866487 Arabidopsis thaliana
AT2G42950 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17858819-17863818 Arabidopsis thaliana
AT2G42950 5.0kb downstream 5.0kb downstream 7669 true Chr2: 17863819-17871487 Arabidopsis thaliana
AT2G42950 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17866488-17871487 Arabidopsis thaliana
AT2G42950 10.0kb upstream 10.0kb upstream 12669 true Chr2: 17853819-17866487 Arabidopsis thaliana
AT2G42950 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17853819-17863818 Arabidopsis thaliana
AT2G42950 10.0kb downstream 10.0kb downstream 12669 true Chr2: 17863819-17876487 Arabidopsis thaliana
AT2G42950 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17866488-17876487 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373545 5261 Brassicaceae View MSA
123838556 5264 Brassicales-Malvales View MSA
124322475 5266 SBM View MSA
124169153 5268 Malvidae View MSA
124050805 5270 Rosid View MSA
123746992 5271 Pentapetalae View MSA
122788455 5272 Eudicot View MSA
122047423 5273 Angiosperm View MSA
121346134 5274 Embryophyte View MSA
123380334 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.009       High
cufflinks 2.389       Low
cufflinks 3.559        
cufflinks 2.956        
cufflinks 5.134        
cufflinks 2.474        

0 Strain