Gene : AT2G42910 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  3691
Name:  ? AT2G42910 Secondary Identifier:  ? PAC:19641174
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-662 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42910 0.5kb upstream 0.5kb upstream 2830 true Chr2: 17855768-17858597 Arabidopsis thaliana
AT2G42910 0.5kb upstream 0.5kb upstream 500 false Chr2: 17855768-17856267 Arabidopsis thaliana
AT2G42910 0.5kb downstream 0.5kb downstream 2830 true Chr2: 17856268-17859097 Arabidopsis thaliana
AT2G42910 0.5kb downstream 0.5kb downstream 500 false Chr2: 17858598-17859097 Arabidopsis thaliana
AT2G42910 1.0kb upstream 1.0kb upstream 3330 true Chr2: 17855268-17858597 Arabidopsis thaliana
AT2G42910 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17855268-17856267 Arabidopsis thaliana
AT2G42910 1.0kb downstream 1.0kb downstream 3330 true Chr2: 17856268-17859597 Arabidopsis thaliana
AT2G42910 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17858598-17859597 Arabidopsis thaliana
AT2G42910 2.0kb upstream 2.0kb upstream 4330 true Chr2: 17854268-17858597 Arabidopsis thaliana
AT2G42910 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17854268-17856267 Arabidopsis thaliana
AT2G42910 2.0kb downstream 2.0kb downstream 4330 true Chr2: 17856268-17860597 Arabidopsis thaliana
AT2G42910 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17858598-17860597 Arabidopsis thaliana
AT2G42910 5.0kb upstream 5.0kb upstream 7330 true Chr2: 17851268-17858597 Arabidopsis thaliana
AT2G42910 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17851268-17856267 Arabidopsis thaliana
AT2G42910 5.0kb downstream 5.0kb downstream 7330 true Chr2: 17856268-17863597 Arabidopsis thaliana
AT2G42910 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17858598-17863597 Arabidopsis thaliana
AT2G42910 10.0kb upstream 10.0kb upstream 12330 true Chr2: 17846268-17858597 Arabidopsis thaliana
AT2G42910 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17846268-17856267 Arabidopsis thaliana
AT2G42910 10.0kb downstream 10.0kb downstream 12330 true Chr2: 17856268-17868597 Arabidopsis thaliana
AT2G42910 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17858598-17868597 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372606 5261 Brassicaceae View MSA
123829619 5264 Brassicales-Malvales View MSA
124337787 5266 SBM View MSA
124247414 5268 Malvidae View MSA
124063296 5270 Rosid View MSA
123738822 5271 Pentapetalae View MSA
122786228 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.348        
cufflinks 27.307        
cufflinks 17.125        
cufflinks 27.175        
cufflinks 15.411       Low
cufflinks 31.916     High High

0 Strain