Gene : AT2G42770 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11266//PTHR11266:SF37 - PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 // EXPRESSED PROTEIN Genomic Order:  3676
Name:  ? AT2G42770 Secondary Identifier:  ? PAC:19641220
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42770 0.5kb upstream 0.5kb upstream 2222 true Chr2: 17798285-17800506 Arabidopsis thaliana
AT2G42770 0.5kb upstream 0.5kb upstream 500 false Chr2: 17800007-17800506 Arabidopsis thaliana
AT2G42770 0.5kb downstream 0.5kb downstream 2222 true Chr2: 17797785-17800006 Arabidopsis thaliana
AT2G42770 0.5kb downstream 0.5kb downstream 500 false Chr2: 17797785-17798284 Arabidopsis thaliana
AT2G42770 1.0kb upstream 1.0kb upstream 2722 true Chr2: 17798285-17801006 Arabidopsis thaliana
AT2G42770 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17800007-17801006 Arabidopsis thaliana
AT2G42770 1.0kb downstream 1.0kb downstream 2722 true Chr2: 17797285-17800006 Arabidopsis thaliana
AT2G42770 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17797285-17798284 Arabidopsis thaliana
AT2G42770 2.0kb upstream 2.0kb upstream 3722 true Chr2: 17798285-17802006 Arabidopsis thaliana
AT2G42770 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17800007-17802006 Arabidopsis thaliana
AT2G42770 2.0kb downstream 2.0kb downstream 3722 true Chr2: 17796285-17800006 Arabidopsis thaliana
AT2G42770 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17796285-17798284 Arabidopsis thaliana
AT2G42770 5.0kb upstream 5.0kb upstream 6722 true Chr2: 17798285-17805006 Arabidopsis thaliana
AT2G42770 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17800007-17805006 Arabidopsis thaliana
AT2G42770 5.0kb downstream 5.0kb downstream 6722 true Chr2: 17793285-17800006 Arabidopsis thaliana
AT2G42770 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17793285-17798284 Arabidopsis thaliana
AT2G42770 10.0kb upstream 10.0kb upstream 11722 true Chr2: 17798285-17810006 Arabidopsis thaliana
AT2G42770 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17800007-17810006 Arabidopsis thaliana
AT2G42770 10.0kb downstream 10.0kb downstream 11722 true Chr2: 17788285-17800006 Arabidopsis thaliana
AT2G42770 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17788285-17798284 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041168 5273 Angiosperm View MSA
122363707 5261 Brassicaceae View MSA
123828839 5264 Brassicales-Malvales View MSA
124338807 5266 SBM View MSA
124243164 5268 Malvidae View MSA
124060900 5270 Rosid View MSA
123751523 5271 Pentapetalae View MSA
122792564 5272 Eudicot View MSA
121344957 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.057        
cufflinks 6.913       Low
cufflinks 22.736        
cufflinks 7.994        
cufflinks 20.658        
cufflinks 7.303        

0 Strain