Gene : AT2G42760 A. thaliana TAIR10
Defline:  (1 of 12) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  3675
Name:  ? AT2G42760 Secondary Identifier:  ? PAC:19638855
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42760 0.5kb upstream 0.5kb upstream 1748 true Chr2: 17795984-17797731 Arabidopsis thaliana
AT2G42760 0.5kb upstream 0.5kb upstream 500 false Chr2: 17797232-17797731 Arabidopsis thaliana
AT2G42760 0.5kb downstream 0.5kb downstream 1748 true Chr2: 17795484-17797231 Arabidopsis thaliana
AT2G42760 0.5kb downstream 0.5kb downstream 500 false Chr2: 17795484-17795983 Arabidopsis thaliana
AT2G42760 1.0kb upstream 1.0kb upstream 2248 true Chr2: 17795984-17798231 Arabidopsis thaliana
AT2G42760 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17797232-17798231 Arabidopsis thaliana
AT2G42760 1.0kb downstream 1.0kb downstream 2248 true Chr2: 17794984-17797231 Arabidopsis thaliana
AT2G42760 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17794984-17795983 Arabidopsis thaliana
AT2G42760 2.0kb upstream 2.0kb upstream 3248 true Chr2: 17795984-17799231 Arabidopsis thaliana
AT2G42760 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17797232-17799231 Arabidopsis thaliana
AT2G42760 2.0kb downstream 2.0kb downstream 3248 true Chr2: 17793984-17797231 Arabidopsis thaliana
AT2G42760 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17793984-17795983 Arabidopsis thaliana
AT2G42760 5.0kb upstream 5.0kb upstream 6248 true Chr2: 17795984-17802231 Arabidopsis thaliana
AT2G42760 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17797232-17802231 Arabidopsis thaliana
AT2G42760 5.0kb downstream 5.0kb downstream 6248 true Chr2: 17790984-17797231 Arabidopsis thaliana
AT2G42760 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17790984-17795983 Arabidopsis thaliana
AT2G42760 10.0kb upstream 10.0kb upstream 11248 true Chr2: 17795984-17807231 Arabidopsis thaliana
AT2G42760 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17797232-17807231 Arabidopsis thaliana
AT2G42760 10.0kb downstream 10.0kb downstream 11248 true Chr2: 17785984-17797231 Arabidopsis thaliana
AT2G42760 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17785984-17795983 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363342 5261 Brassicaceae View MSA
123836976 5264 Brassicales-Malvales View MSA
124346945 5266 SBM View MSA
124250644 5268 Malvidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.291        
cufflinks 259.43     High  
cufflinks 19.743        
cufflinks 224.808     High  
cufflinks 5.1       Low
cufflinks 203.702     High  

0 Strain