Gene : AT2G42720 A. thaliana TAIR10
Defline:  (1 of 43) PTHR31639//PTHR31639:SF6 - FAMILY NOT NAMED // FBD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3671
Name:  ? AT2G42720 Secondary Identifier:  ? PAC:19642017
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42720 0.5kb upstream 0.5kb upstream 2513 true Chr2: 17784909-17787421 Arabidopsis thaliana
AT2G42720 0.5kb upstream 0.5kb upstream 500 false Chr2: 17784909-17785408 Arabidopsis thaliana
AT2G42720 0.5kb downstream 0.5kb downstream 2513 true Chr2: 17785409-17787921 Arabidopsis thaliana
AT2G42720 0.5kb downstream 0.5kb downstream 500 false Chr2: 17787422-17787921 Arabidopsis thaliana
AT2G42720 1.0kb upstream 1.0kb upstream 3013 true Chr2: 17784409-17787421 Arabidopsis thaliana
AT2G42720 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17784409-17785408 Arabidopsis thaliana
AT2G42720 1.0kb downstream 1.0kb downstream 3013 true Chr2: 17785409-17788421 Arabidopsis thaliana
AT2G42720 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17787422-17788421 Arabidopsis thaliana
AT2G42720 2.0kb upstream 2.0kb upstream 4013 true Chr2: 17783409-17787421 Arabidopsis thaliana
AT2G42720 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17783409-17785408 Arabidopsis thaliana
AT2G42720 2.0kb downstream 2.0kb downstream 4013 true Chr2: 17785409-17789421 Arabidopsis thaliana
AT2G42720 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17787422-17789421 Arabidopsis thaliana
AT2G42720 5.0kb upstream 5.0kb upstream 7013 true Chr2: 17780409-17787421 Arabidopsis thaliana
AT2G42720 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17780409-17785408 Arabidopsis thaliana
AT2G42720 5.0kb downstream 5.0kb downstream 7013 true Chr2: 17785409-17792421 Arabidopsis thaliana
AT2G42720 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17787422-17792421 Arabidopsis thaliana
AT2G42720 10.0kb upstream 10.0kb upstream 12013 true Chr2: 17775409-17787421 Arabidopsis thaliana
AT2G42720 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17775409-17785408 Arabidopsis thaliana
AT2G42720 10.0kb downstream 10.0kb downstream 12013 true Chr2: 17785409-17797421 Arabidopsis thaliana
AT2G42720 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17787422-17797421 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379322 5261 Brassicaceae View MSA
123840956 5264 Brassicales-Malvales View MSA
124350537 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.14     Low  
cufflinks 0.422        
cufflinks 0.029     Low Low
cufflinks 0.624        
cufflinks 0.044     Low Low
cufflinks 0.564        

0 Strain