Gene : AT2G42710 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23105//PTHR23105:SF51 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  3670
Name:  ? AT2G42710 Secondary Identifier:  ? PAC:19640772
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42710 0.5kb upstream 0.5kb upstream 3256 true Chr2: 17781808-17785063 Arabidopsis thaliana
AT2G42710 0.5kb upstream 0.5kb upstream 500 false Chr2: 17781808-17782307 Arabidopsis thaliana
AT2G42710 0.5kb downstream 0.5kb downstream 3256 true Chr2: 17782308-17785563 Arabidopsis thaliana
AT2G42710 0.5kb downstream 0.5kb downstream 500 false Chr2: 17785064-17785563 Arabidopsis thaliana
AT2G42710 1.0kb upstream 1.0kb upstream 3756 true Chr2: 17781308-17785063 Arabidopsis thaliana
AT2G42710 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17781308-17782307 Arabidopsis thaliana
AT2G42710 1.0kb downstream 1.0kb downstream 3756 true Chr2: 17782308-17786063 Arabidopsis thaliana
AT2G42710 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17785064-17786063 Arabidopsis thaliana
AT2G42710 2.0kb upstream 2.0kb upstream 4756 true Chr2: 17780308-17785063 Arabidopsis thaliana
AT2G42710 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17780308-17782307 Arabidopsis thaliana
AT2G42710 2.0kb downstream 2.0kb downstream 4756 true Chr2: 17782308-17787063 Arabidopsis thaliana
AT2G42710 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17785064-17787063 Arabidopsis thaliana
AT2G42710 5.0kb upstream 5.0kb upstream 7756 true Chr2: 17777308-17785063 Arabidopsis thaliana
AT2G42710 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17777308-17782307 Arabidopsis thaliana
AT2G42710 5.0kb downstream 5.0kb downstream 7756 true Chr2: 17782308-17790063 Arabidopsis thaliana
AT2G42710 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17785064-17790063 Arabidopsis thaliana
AT2G42710 10.0kb upstream 10.0kb upstream 12756 true Chr2: 17772308-17785063 Arabidopsis thaliana
AT2G42710 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17772308-17782307 Arabidopsis thaliana
AT2G42710 10.0kb downstream 10.0kb downstream 12756 true Chr2: 17782308-17795063 Arabidopsis thaliana
AT2G42710 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17785064-17795063 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367066 5261 Brassicaceae View MSA
123831157 5264 Brassicales-Malvales View MSA
124342923 5266 SBM View MSA
124241231 5268 Malvidae View MSA
124068944 5270 Rosid View MSA
123740945 5271 Pentapetalae View MSA
122793380 5272 Eudicot View MSA
122043496 5273 Angiosperm View MSA
121348791 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.585        
cufflinks 9.542        
cufflinks 7.178        
cufflinks 10.128        
cufflinks 5.807       Low
cufflinks 12.812       High

0 Strain