Gene : LBD16 A. thaliana TAIR10
Primary Identifier:  ? AT2G42430 Defline:  (1 of 1) PTHR31529:SF10 - LOB DOMAIN-CONTAINING PROTEIN 16
Genomic Order:  3643 Name:  ? AT2G42430
Secondary Identifier:  ? PAC:19640760
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42430 0.5kb upstream 0.5kb upstream 2352 true Chr2: 17662944-17665295 Arabidopsis thaliana
AT2G42430 0.5kb upstream 0.5kb upstream 500 false Chr2: 17662944-17663443 Arabidopsis thaliana
AT2G42430 0.5kb downstream 0.5kb downstream 2352 true Chr2: 17663444-17665795 Arabidopsis thaliana
AT2G42430 0.5kb downstream 0.5kb downstream 500 false Chr2: 17665296-17665795 Arabidopsis thaliana
AT2G42430 1.0kb upstream 1.0kb upstream 2852 true Chr2: 17662444-17665295 Arabidopsis thaliana
AT2G42430 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17662444-17663443 Arabidopsis thaliana
AT2G42430 1.0kb downstream 1.0kb downstream 2852 true Chr2: 17663444-17666295 Arabidopsis thaliana
AT2G42430 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17665296-17666295 Arabidopsis thaliana
AT2G42430 2.0kb upstream 2.0kb upstream 3852 true Chr2: 17661444-17665295 Arabidopsis thaliana
AT2G42430 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17661444-17663443 Arabidopsis thaliana
AT2G42430 2.0kb downstream 2.0kb downstream 3852 true Chr2: 17663444-17667295 Arabidopsis thaliana
AT2G42430 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17665296-17667295 Arabidopsis thaliana
AT2G42430 5.0kb upstream 5.0kb upstream 6852 true Chr2: 17658444-17665295 Arabidopsis thaliana
AT2G42430 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17658444-17663443 Arabidopsis thaliana
AT2G42430 5.0kb downstream 5.0kb downstream 6852 true Chr2: 17663444-17670295 Arabidopsis thaliana
AT2G42430 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17665296-17670295 Arabidopsis thaliana
AT2G42430 10.0kb upstream 10.0kb upstream 11852 true Chr2: 17653444-17665295 Arabidopsis thaliana
AT2G42430 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17653444-17663443 Arabidopsis thaliana
AT2G42430 10.0kb downstream 10.0kb downstream 11852 true Chr2: 17663444-17675295 Arabidopsis thaliana
AT2G42430 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17665296-17675295 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027059 5273 Angiosperm View MSA
122360496 5261 Brassicaceae View MSA
123840932 5264 Brassicales-Malvales View MSA
124351177 5266 SBM View MSA
124251036 5268 Malvidae View MSA
124064336 5270 Rosid View MSA
123742221 5271 Pentapetalae View MSA
122792455 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low  
cufflinks 0.539        
cufflinks 0.02     Low  
cufflinks 1.321       High
cufflinks 0.006     Low Low
cufflinks 0.617        

0 Strain