Gene : VOZ2 A. thaliana TAIR10
Primary Identifier:  ? AT2G42400 Defline:  (1 of 1) PTHR33873:SF2 - TRANSCRIPTION FACTOR VOZ2
Genomic Order:  3641 Name:  ? AT2G42400
Secondary Identifier:  ? PAC:19640906
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42400 0.5kb upstream 0.5kb upstream 3108 true Chr2: 17654232-17657339 Arabidopsis thaliana
AT2G42400 0.5kb upstream 0.5kb upstream 500 false Chr2: 17656840-17657339 Arabidopsis thaliana
AT2G42400 0.5kb downstream 0.5kb downstream 3108 true Chr2: 17653732-17656839 Arabidopsis thaliana
AT2G42400 0.5kb downstream 0.5kb downstream 500 false Chr2: 17653732-17654231 Arabidopsis thaliana
AT2G42400 1.0kb upstream 1.0kb upstream 3608 true Chr2: 17654232-17657839 Arabidopsis thaliana
AT2G42400 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17656840-17657839 Arabidopsis thaliana
AT2G42400 1.0kb downstream 1.0kb downstream 3608 true Chr2: 17653232-17656839 Arabidopsis thaliana
AT2G42400 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17653232-17654231 Arabidopsis thaliana
AT2G42400 2.0kb upstream 2.0kb upstream 4608 true Chr2: 17654232-17658839 Arabidopsis thaliana
AT2G42400 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17656840-17658839 Arabidopsis thaliana
AT2G42400 2.0kb downstream 2.0kb downstream 4608 true Chr2: 17652232-17656839 Arabidopsis thaliana
AT2G42400 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17652232-17654231 Arabidopsis thaliana
AT2G42400 5.0kb upstream 5.0kb upstream 7608 true Chr2: 17654232-17661839 Arabidopsis thaliana
AT2G42400 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17656840-17661839 Arabidopsis thaliana
AT2G42400 5.0kb downstream 5.0kb downstream 7608 true Chr2: 17649232-17656839 Arabidopsis thaliana
AT2G42400 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17649232-17654231 Arabidopsis thaliana
AT2G42400 10.0kb upstream 10.0kb upstream 12608 true Chr2: 17654232-17666839 Arabidopsis thaliana
AT2G42400 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17656840-17666839 Arabidopsis thaliana
AT2G42400 10.0kb downstream 10.0kb downstream 12608 true Chr2: 17644232-17656839 Arabidopsis thaliana
AT2G42400 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17644232-17654231 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367037 5261 Brassicaceae View MSA
123839912 5264 Brassicales-Malvales View MSA
124347095 5266 SBM View MSA
124247397 5268 Malvidae View MSA
123952147 5270 Rosid View MSA
123756634 5271 Pentapetalae View MSA
122797844 5272 Eudicot View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.154        
cufflinks 11.265        
cufflinks 6.806       Low
cufflinks 12.342       High
cufflinks 9.077        
cufflinks 10.198        

0 Strain