Gene : AT2G41410 A. thaliana TAIR10

Defline:  (1 of 1) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3535
Name:  ? AT2G41410 Secondary Identifier:  ? PAC:19638990

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41410 0.5kb upstream 0.5kb upstream 1657 true Chr2: 17261728-17263384 Arabidopsis thaliana
AT2G41410 0.5kb upstream 0.5kb upstream 500 false Chr2: 17262885-17263384 Arabidopsis thaliana
AT2G41410 0.5kb downstream 0.5kb downstream 1657 true Chr2: 17261228-17262884 Arabidopsis thaliana
AT2G41410 0.5kb downstream 0.5kb downstream 500 false Chr2: 17261228-17261727 Arabidopsis thaliana
AT2G41410 1.0kb upstream 1.0kb upstream 2157 true Chr2: 17261728-17263884 Arabidopsis thaliana
AT2G41410 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17262885-17263884 Arabidopsis thaliana
AT2G41410 1.0kb downstream 1.0kb downstream 2157 true Chr2: 17260728-17262884 Arabidopsis thaliana
AT2G41410 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17260728-17261727 Arabidopsis thaliana
AT2G41410 2.0kb upstream 2.0kb upstream 3157 true Chr2: 17261728-17264884 Arabidopsis thaliana
AT2G41410 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17262885-17264884 Arabidopsis thaliana
AT2G41410 2.0kb downstream 2.0kb downstream 3157 true Chr2: 17259728-17262884 Arabidopsis thaliana
AT2G41410 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17259728-17261727 Arabidopsis thaliana
AT2G41410 5.0kb upstream 5.0kb upstream 6157 true Chr2: 17261728-17267884 Arabidopsis thaliana
AT2G41410 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17262885-17267884 Arabidopsis thaliana
AT2G41410 5.0kb downstream 5.0kb downstream 6157 true Chr2: 17256728-17262884 Arabidopsis thaliana
AT2G41410 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17256728-17261727 Arabidopsis thaliana
AT2G41410 10.0kb upstream 10.0kb upstream 11157 true Chr2: 17261728-17272884 Arabidopsis thaliana
AT2G41410 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17262885-17272884 Arabidopsis thaliana
AT2G41410 10.0kb downstream 10.0kb downstream 11157 true Chr2: 17251728-17262884 Arabidopsis thaliana
AT2G41410 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17251728-17261727 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364540 5261 Brassicaceae View MSA
123839730 5264 Brassicales-Malvales View MSA
124341039 5266 SBM View MSA
124242580 5268 Malvidae View MSA
124061078 5270 Rosid View MSA
123739522 5271 Pentapetalae View MSA
122793851 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 120.102     High  
cufflinks 79.977     High  
cufflinks 105.363     High  
cufflinks 94.872     High  
cufflinks 168.15     High High
cufflinks 76.512     High Low

0 Strain